Rhodococcus pyridinivorans SB3094: Y013_21995
Help
Entry
Y013_21995 CDS
T02974
Name
(GenBank) pseudouridine synthase
KO
K06177
tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:
5.4.99.28
5.4.99.29
]
Organism
rpy
Rhodococcus pyridinivorans SB3094
Brite
KEGG Orthology (KO) [BR:
rpy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rpy03009
]
Y013_21995
03016 Transfer RNA biogenesis [BR:
rpy03016
]
Y013_21995
Enzymes [BR:
rpy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
Y013_21995
5.4.99.29 23S rRNA pseudouridine746 synthase
Y013_21995
Ribosome biogenesis [BR:
rpy03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Y013_21995
Transfer RNA biogenesis [BR:
rpy03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
Y013_21995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AHD23108
UniProt:
V9XL54
LinkDB
All DBs
Position
complement(4665671..4666636)
Genome browser
AA seq
321 aa
AA seq
DB search
MPMPSPLPVRNGVGPTRLRVPTSGPWSTVAEYVVARFDHLDAEDLYRRFDDGEIVGIDGE
PIGRSTELGAHRFVWYYRDLPVEDPVPFHEEILHIDDDLVVVDKPHFLPTTPGGRYLRES
ALVRLRTRLDNPDLTPIHRLDRATAGLVMFSARPETRGAYQSLFEKRRVSKVYEAVSALP
AEWDPAAPEIAGRPVPVLYRNHIEARRGELRVVVDDTREPNSETLIEVLGSGVSRSGRAV
LHTLLRPHTGRMHQLRVHLAALGIGILGDHWYPVLLPETPDDHSLPLQLLARELEFVDPL
SGAERRFSTRRTLAEAPTSQD
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
gtgccgatgccctcacccttgcccgtcaggaacggggtcgggcccacgcgactgcgtgtt
ccgacctccggtccgtggtcgacggtcgccgagtacgtcgtcgcacgcttcgaccatctc
gacgccgaggatctctaccgccgattcgacgacggcgagatcgtgggcatcgacggagaa
ccgatcggtcgcagcaccgaactcggagcgcaccggttcgtctggtactaccgcgatctg
cccgtcgaggacccggtgccgttccacgaggaaatcctgcatatcgacgacgacctcgtc
gtggtcgacaaaccgcacttcctgccgaccactccgggcgggcgctacctacgcgagtcc
gcgctggtccggctgcggacccgcctcgacaacccggatctgacacccatccaccgactc
gaccgggcgaccgccggactcgtgatgttctcggcccggcccgagacacgcggcgcctac
cagtcgctgttcgagaagcgccgggtctccaaggtgtacgaggcggtgtccgcactgccg
gcggagtgggatccggcagcgccggagatcgccggacgtccggtccctgtgctgtaccgc
aatcacatagaggcgcggcgcggtgagttgcgcgtcgtcgtcgacgacacccgcgaaccc
aactcggagaccctgatcgaggtgctcggctccggggtgagcaggtcgggacgggccgtt
ctgcacaccctgctgcgcccgcatacgggtcggatgcatcagctgcgagtacacctggcg
gcgctcggtatcgggatcctcggcgaccactggtatcccgtcctgctgcccgagacaccg
gacgaccattcgctccccctccaattgctcgcgcgggaactcgaattcgtcgaccccttg
tcgggggctgagcgtcgcttctccacccgacgcaccctggccgaagcaccgacctcgcag
gactga
DBGET
integrated database retrieval system
