Rhodococcus qingshengii: C1M55_00560
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Entry
C1M55_00560 CDS
T05315
Name
(GenBank) hypothetical protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
rqi
Rhodococcus qingshengii
Brite
KEGG Orthology (KO) [BR:
rqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rqi03009
]
C1M55_00560
Ribosome biogenesis [BR:
rqi03009
]
Prokaryotic type
ribosomal protein modification factors
C1M55_00560
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YcaO
DUF5699
Motif
Other DBs
NCBI-ProteinID:
AUS29748
LinkDB
All DBs
Position
1:complement(122666..124006)
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AA seq
446 aa
AA seq
DB search
MDDLLVDARSGVLTSLEPHIRSDMPTGWVGWAARVADTRNFGGSGSLFRADPYGFGASIR
NDAAARGAATGEAVERYCGNVVPEDLVRSSASALELAGSRVVDPAKFALYSEDQYRLPGF
PFVPFASDLNIRWALGHTMDEKAPTYVPAALTYLGYYTGTRRCEPPIASLQYAGIAAGRS
RDEAEMSALLELLERDATALWWCGDRSQPAIELSDWERLPAHRQLGDLESQTRSVRVLLL
PSPFGIPVAAAWIRDDRRGLVALGTACRPTVEAAVSKALVEAYAVLAITIDLADPDGPTW
RSVADGTLPAHLYKPFRADRRYRDEFDPQWKDIVDLPTVAQLYLDPTMALAAEEHLFDYT
ETLSVSKIPDEAPLDLASLVAFLTSRGHQPISVDLTTGDISIAGLHVVRVLTPGLYNNAP
AAFPLLGGSRLTSASTTHLHLPVPLA
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
gtggatgacttgctggtcgacgcccggagcggcgtgctgacctcactggaaccacacatt
cgctcggacatgccgacgggctgggtcggttgggccgcgagggtggccgacaccagaaac
ttcggcggcagcggttcactgtttcgcgcggacccttacggattcggggcttcgatacgc
aacgatgcagcggcccgcggggcggcaaccggtgaggccgtcgaaagatattgcggcaac
gtggtccccgaagatctggtccgcagcagtgcatcagcgctggaactggccggctcacgg
gtcgtcgatccggcgaaatttgcgttgtacagcgaggatcagtaccgccttcccggattc
ccctttgttcccttcgcctctgatctgaacattcgctgggcattgggtcacaccatggac
gagaaagcgcccacctacgtgcctgcggccctgacttatctcgggtactacacaggcacc
cgtcgctgcgagccaccgatcgcgtcgttgcagtacgccggaatcgcagcgggacgctca
cgcgacgaggccgagatgtcagctctgctggaacttctcgaacgcgatgccaccgcgctg
tggtggtgcggggaccggtcacagccggcgatcgagctttccgactgggagcggttgcct
gcgcaccgccaactcggggatctggagagccagacccggagcgttcgagtgctgctgctt
ccctcccccttcggcattcccgtcgccgcagcgtggatccgcgatgaccgacgtggactg
gtcgcgctgggcacagcttgtcgaccgacggtggaggcggcagtctcgaaggcactggtc
gaggcgtacgcggtacttgccatcacgatcgacctcgccgaccccgacgggccgacctgg
cgcagcgtggcggacggaacgctgccggcgcacctgtacaaaccctttcgggccgaccgt
cgttaccgggacgagttcgatccgcaatggaaagacatcgtcgatctgccgaccgtcgcc
caactttatcttgatcccacgatggctctggccgcagaggaacatctcttcgactacacc
gaaacactttcggtatcaaagattcccgacgaagcgccgttggatctggcttctctcgta
gcgtttctgacgtcacggggacaccagccgatttccgtcgatctcaccaccggcgacatc
tcgattgccgggttgcacgtcgtccgcgtcctgactccgggcctgtacaacaacgccccg
gcagcctttccccttcttggaggtagcagattgaccagcgcatcgaccacccatctgcat
ctgccggtccccctcgcatga
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