Rhodococcus qingshengii: C1M55_01635
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Entry
C1M55_01635 CDS
T05315
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
rqi
Rhodococcus qingshengii
Brite
KEGG Orthology (KO) [BR:
rqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rqi03400
]
C1M55_01635
DNA repair and recombination proteins [BR:
rqi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
C1M55_01635
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
MTES_1575
DUF559
Motif
Other DBs
NCBI-ProteinID:
AUS29935
LinkDB
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Position
1:complement(354820..355224)
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AA seq
134 aa
AA seq
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MPATDPATSARMSAQRRRDTKPEIALRRELHRRGLRYFVDRAPVKGVRRRADLVFPRRKV
AVFVDGCFWHSCPQHATFPKNNAQWWTDKLAANVVRDRDTDARLAEQGWTVIRIWEHEDP
LVAAERVQKALLGP
NT seq
405 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgcgacggatcctgccaccagcgctcggatgagcgctcagcgtcggcgcgacacc
aaacccgaaatcgcacttcgacgcgagctgcatcgacgcggactccggtacttcgtggat
cgggcgcctgtcaaaggtgttcgccgacgggccgatctggtatttccacgccgcaaagtc
gcggtgttcgtggacggatgcttctggcacagctgcccgcagcatgcgacgtttcccaag
aacaacgcgcagtggtggacggacaagttggccgccaacgtggttcgagaccgcgacacc
gatgcacgtctggcagagcagggttggaccgtcatccgcatctgggagcacgaagatccg
ctggtagcggccgaacgcgtccagaaagccctgctcggtccgtaa
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