Rhodococcus qingshengii: C1M55_03245
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Entry
C1M55_03245 CDS
T05315
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
rqi
Rhodococcus qingshengii
Pathway
rqi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rqi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
C1M55_03245
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rqi02000
]
C1M55_03245
Transporters [BR:
rqi02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
C1M55_03245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AUS30211
LinkDB
All DBs
Position
1:complement(695067..696668)
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AA seq
533 aa
AA seq
DB search
MKHRSYSTLAATAGLALVLSACSSGGTSSGSGGGEPLTDGTFRYALQGDPGALNPIMSGS
AATAEISKLAYDSLVYQDPETSEFKPWLAEKWEETPTSASFTIREGVTCTDGSTLTAQTV
ANNINFVADPAKGSQQRGTTVPIGASATADLATRTITVTTPAPTPFLLLTISRLPIMCDA
GLEDPTASNNKSLGSGMFEVTEVSANDHYTFERRDGYSWGPDDTTSDTPGVPKTVIAVMA
PNVSTAANQLLSGELSASPIAGPDKDRIDAANFDSVQRPLPAGQMYFNQIADNPTSDPAV
RKALVQAVNLDDLAEVITGGQGTRATSLVSVEPRACVYDSVAGNIPDFDLSAAKATLDAA
GWTAGSDGKRSKDGKPLTLRLFYAAGEDARSAAAELTQSAWSDLGATVEVTGADQTKVVD
VMLSGKDNNQWDIAWIQINNSVPSGFVPFFSGPAPAAGKNFSSINNPAYEAAVAKASGLT
GDAACAEWADAESQITKTVSAVPFADTVLSFYFNKAGLAFGKTFIGSALRLYQ
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaccgctcctattcgacgcttgccgcgaccgcggggctcgcgctcgtattgtcg
gcttgcagctcgggaggcacgtcctcgggctccggcggcggtgagcctctgactgacgga
accttccggtacgcgttgcaaggcgatccgggtgcactcaacccgatcatgtccggctct
gcggcaaccgcggaaatttcgaagctggcgtacgactccctggtctaccaggatcctgaa
accagtgaattcaaaccatggttggccgagaagtgggaagaaacgccgacctccgcgtcc
ttcaccattcgtgaaggcgtgacctgtaccgacgggtcgacgctgactgcacagaccgtc
gcgaacaacatcaacttcgtagccgatccagccaagggttcacaacaacgcggcaccaca
gttcccatcggcgcttcggccactgccgatctcgccacccgcaccatcacggtaaccact
ccggcgccgaccccgttcctcctcctcaccatcagtcgcctcccgatcatgtgcgatgcc
ggtctcgaagatccgaccgcctcgaacaacaagtcgctgggctccggcatgttcgaagtc
accgaagtctcggccaatgaccactacacgttcgagcgtcgtgacggttacagctggggg
cccgacgacaccacctccgacacaccgggtgtccccaagacagtcattgctgtcatggca
cccaatgtcagcaccgcagcaaaccagcttctctcaggcgaactgagcgcatctccgatc
gccggtccggacaaggatcgcatcgatgccgccaatttcgactcggtccagcgcccactt
cccgccggtcagatgtacttcaatcagattgcggacaatccgaccagcgatcccgccgtt
cgaaaagctctcgtccaggctgtcaatctcgacgatctcgctgaagtcatcactggcggc
cagggcacccgtgcaacaagtcttgtctccgtcgagccccgagcctgtgtgtacgactct
gtcgcaggcaacattccggacttcgacctcagcgcagcaaaggcaacactggacgctgca
ggttggaccgccggctccgacggcaaacgaagcaaggacggaaagccgctgaccctccgc
ctcttctacgctgccggcgaagatgcgcgcagcgcggcagccgagctcacccagtcggca
tggtccgacctcggtgcgaccgtcgaggtgacaggagccgaccagaccaaggttgtcgac
gtcatgctcagtggcaaggacaacaaccagtgggacatcgcgtggatccagatcaacaat
tcggttcccagcgggttcgtaccgttcttctccggtcctgctccggcagcaggtaagaat
ttctcttcgatcaacaaccccgcctacgaagcagccgttgccaaggcctccggtttgacc
ggcgacgcagcatgcgcggagtgggcggacgccgagtcgcagatcaccaaaacggtgtca
gcagtcccgtttgcagatacggtcttgagcttctacttcaacaaggccggactcgcattc
ggtaagaccttcatcggttctgcgttgcgcctctaccagtag
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