Rhodococcus qingshengii: C1M55_07995
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Entry
C1M55_07995 CDS
T05315
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
rqi
Rhodococcus qingshengii
Brite
KEGG Orthology (KO) [BR:
rqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rqi03021
]
C1M55_07995
Transcription machinery [BR:
rqi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
C1M55_07995
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_Crp_2
HTH_3
MarR
MarR_2
HTH_24
Sigma70_ECF
HTH_31
DUF7343
GntR
HTH_23
KORA
LacI
UBA_2
DUF1492
HTH_37
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
AUS31060
LinkDB
All DBs
Position
1:complement(1711487..1712281)
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AA seq
264 aa
AA seq
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MTASADGPSRPRRRSTDEYRDVIPVFEELRTLEPHSPEYERVRTALITRCLPLAEHIARR
FDGRGEAHDDLVQVARLGLVNAVDRFDSTRGSDFVSFAVPTVMGEVRRHFRDTGWALRVP
RRMKELHFQLGQAISELSQQLGHAPTVDELAETLGIEREEVAQALIAGNAYQTVSVDGAA
SNHTDDLPLVETLGDYDAALENVENHEALRPLLDKLPERERTVLMLRFFGNLTQTQIAEK
VGVSQMHVSRLLAKTLSNLREQLD
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgcttccgcagacggcccgtcacgcccgcgtcggcggtccaccgacgaatatcgg
gacgtaataccagttttcgaggaactgcggaccctcgagccccacagcccggagtacgaa
cgagtgcgcactgcactcatcaccagatgcctaccgttggccgagcacatcgccagacga
ttcgacggtcgtggcgaggcacacgacgatctggttcaggtggcgcgtctcggtctggtc
aacgccgtcgaccgtttcgattccacgcgcggatccgatttcgtctcgttcgcagttccc
accgtcatgggcgaggttcgacgacacttccgcgacaccggttgggcattgcgggttccc
cgccggatgaaggagttgcacttccaactcgggcaggccatcagcgagctgtcacaacag
ctcggacacgcgccgaccgtcgacgagttggccgagacgttggggatcgaacgcgaagaa
gttgcccaggccttgatcgccggcaacgcgtatcagacggtctcggtcgacggtgccgcg
tccaatcacaccgacgatctcccgctcgtggaaacactcggtgactacgacgcagcactc
gagaacgtcgagaatcacgaggcgttgcgtccgcttctcgacaagctgcccgagcgagag
cggacggtgttgatgctcagattcttcggaaatctgacgcagacacagatcgccgagaaa
gtcggtgtgtcccagatgcacgtgtcgaggttgctcgcgaagacattgagtaatcttcgc
gagcaactcgactga
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