Rhodococcus qingshengii: C1M55_09525
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Entry
C1M55_09525 CDS
T05315
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
rqi
Rhodococcus qingshengii
Brite
KEGG Orthology (KO) [BR:
rqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rqi03016
]
C1M55_09525
Enzymes [BR:
rqi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
C1M55_09525
Transfer RNA biogenesis [BR:
rqi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
C1M55_09525
Prokaryotic type
C1M55_09525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AUS31329
LinkDB
All DBs
Position
1:2064100..2064984
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AA seq
294 aa
AA seq
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MVSAHAESNEPAAPIGDGGLVRLRLDISYDGTDFSGWARQTDLRTVCGEIEDKLGTVLRR
PVQLTVAGRTDAGVHATGQVAHVDVPGELLPDDPSRLVRRLARFLPKDVRVKQISVVPGD
FDARFSAMRRYYEYRVTNAAFGVEPLRARDTVSYPKPLDLGAMQDASNRLLGLHNFAAFC
KRREGATTVRELQRFDWTQVGTVFTAYVNADAFCWSMVRSLVGAVLSVGEGRRTADWVAG
LLDETSRSSSILVAPAHGLSLVRVDYPDYSELAARNAITRETREIPSSGGCCGD
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
ttggtttcggcacacgctgaatcgaacgagcccgccgcccccatcggggacggcgggctc
gttcgattgcggctcgacatctcctacgacggcaccgacttctcgggttgggcccgccag
acagatctgcgcaccgtgtgcggtgagatcgaagacaagttgggaacggtgcttcgacgc
ccggttcagttgaccgttgccggtcgaaccgacgccggtgtccacgccaccggtcaggta
gcgcacgtcgacgttccgggagagttgctcccggacgatccgtctcgactcgtgcgcaga
cttgcacgatttctgcccaaggacgttcgggtcaaacagatatcggtggttccgggtgac
ttcgatgcgcgcttctccgcgatgcgacgttattacgagtaccgggtgaccaacgcggcg
ttcggagtggaaccactacgcgcacgcgacaccgtctcgtatcccaaaccactcgatctc
ggagcgatgcaggatgcgtcgaatcggctgctgggtctgcacaacttcgcggcattctgc
aagcgtcgagaaggcgctacgacggtgcgggagctgcagcgtttcgactggacccaagtg
ggcacggtgttcacggcctacgtgaatgctgacgcattctgctggtcgatggttcgcagt
ctcgtcggcgcagtcctctccgtcggtgagggacggcgcaccgccgactgggtggcaggg
ttgctcgacgaaacgtcgcgatccagttccatcctcgttgctccggcgcacggactttcg
ttggtccgcgtggactaccccgactactcggaactggctgcccgcaacgcgattacccgt
gagacccgcgagattccgtcttcgggtggatgctgcggcgactga
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