Rhodococcus qingshengii: C1M55_11275
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Entry
C1M55_11275 CDS
T05315
Name
(GenBank) ATP-dependent helicase
Organism
rqi
Rhodococcus qingshengii
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
UvrD-helicase
UvrD_C
AAA_19
AAA_30
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AUS31633
UniProt:
A0AA41EXF4
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All DBs
Position
1:2431824..2435186
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AA seq
1120 aa
AA seq
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MSETATRSKVTIPRARLVHRTAPSPIPRTWDEGTARLFAPPSEDPFQLAFGPVSFGSGAA
WSPWQVLGSPGTGKTSLLVDLAVQKISGGEDPESVLVLTQSRRAATQVREQITAGLLGYE
QERGPQATREPLVRTVHSYAFAVLRLQAAAHGNAPPRLITGAEQDSVLREMLRGDIEDGA
LRWPERLRPALGLNGFAVELRDLMLRANERGLGPEDLVKLGKKRGRPEWVAAGRFAEAYE
QGVLLRGSVGVEAPEATAPALDAAELIGAALTAFATDPELLRSERARIRHLLVDDAQHLD
PQAAQLVRLIGTATAGTVIAGDPDQSVFGFRGADSAFLLGLAERGDERQIVLPTTFRNNA
DVASIAAKIAARLPGNLAHRIAVPSDLTDEDPGRASVRVLGTTAKEAAVVADTLRRAHLL
DGIAWSDMAVIVRSVPRTLAPLRRALLAAGVPVTTAATELPLARQHGVSGLLLVLRALGG
DQFTGDDALALMAGPIGGAEPVTLRRLRRGLRRVELASGSDRDSSELLRLILIDEDRAQS
KRLMGKLTDVEAAALNRVLSVLRKARVPLERGLGVEEVLWAAWQATGLERRWAAASARGG
PIGSQADRDLDAVVALFDAAANYVDRLPRSQLAGFVDYLTSQEIPTDSRSRSVITPDAVT
VVSAHAAAGREWAVVAVAGVQEGLWPSLRARGSLLRTEALIDLVNGVSDGSDSAAERLSR
TAPLLAEERRLFLVACSRARRRLLITAVESASGDTDLVPSRFVDELIRGDAYSDDPSSDL
DVVAPETGDTRVLSLPALVAQLRSVVCDPDIAHFDPEKHSRAARQLARLAAAGVRGAHPD
QWYGTAEPSTAAPMWQPEDGPVSLSPSTIELLETCPLRWVFERHGGSDGDNTHAIAGTLV
HTLVQALAGRIPPDQVEKALENAWESIDLGSQWYSRRELNRTREMLATFTAWMNATRGEL
TEVGVEVAVEGVLEPREEGAPAVKLRGRIDRLERDTEGRPVVVDVKTARNPVSNEAAQSH
AQLAAYQVAAAEGAIAGEPATQPGGARLVFVAKSNKKDGAAQRVQPPLTAEAVEMWRDVI
HNAAAATQGPQYLARVNDGCRHCPVRSSCPAHDEGRQVSN
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgagacggcaacacgcagcaaggtcaccatcccgcgggcgcggttggtgcaccga
actgcgccgtctccgataccccgaacatgggacgaagggacggcccggctgttcgcgccg
ccgtccgaggatcctttccaactcgcgttcggccctgtttcattcggctcgggggccgcc
tggagtccctggcaggtactcggcagccccggaacgggcaagacgtcccttctcgtggat
ctggcagtgcagaagatctccggtggcgaagatcctgaatcggtcctggtgctcacccag
tcgcgccgggcagcgacgcaggtccgcgagcagatcacggccgggttgctcgggtacgaa
caagaacgcggaccgcaggcaactcgtgagccgttggtccgcaccgttcactcgtacgcc
tttgccgtactccggcttcaagccgcagcgcacggcaacgcgccgccacgcctgatcacc
ggcgccgagcaggactcggtgctccgagagatgttgcgcggcgacatcgaagacggtgcg
ctccggtggccggagcgcctgcgacccgcattgggtttgaacggctttgccgtcgaactt
cgagatctgatgttgcgagcgaacgagcgcggactcggtcccgaagatctggtcaagctc
ggcaagaagcgtggacgtccggagtgggtggcggccgggcggttcgccgaggcctacgag
caaggcgtgctgctacgcggcagtgtcggtgtcgaggctccggaggcgacggcgccggca
ctcgacgcggccgagttgatcggcgcggcattgaccgcgttcgccaccgatcccgaattg
cttcgctccgagcgcgctcggatccggcacctactcgtcgacgacgcacaacatctggat
ccgcaggcggcgcagctggttcggctgatcggaaccgcaactgcgggcacggtcatcgcc
ggtgatcccgatcagtcggtcttcgggttccgcggtgcggattcggcgttcctactcgga
ctcgccgagcgcggagacgagcgccagatcgtcctgcccaccacgtttcgcaacaacgcc
gacgtcgcgtcgatcgcggcgaagatcgctgcgcggctgcccggcaacctcgctcatcgc
atcgcggttccatccgatctcaccgatgaggacccggggcgggcgtcggtgcgggttctc
ggtacgacggccaaagaagcggcagtcgtcgcagataccttgcgccgggcgcatctgctg
gacgggattgcttggtccgacatggccgtcatcgttcggtcggtcccgcgcactctcgcc
cctctccggcgagccctgctcgcggccggggtacccgtcacgaccgctgccaccgaattg
ccgctggccaggcaacacggagtgtccggcctgctgctggtccttcgggcgctcggcggc
gatcagttcaccggcgacgacgcgcttgccctgatggccggtcccatcggcggcgccgag
ccggtcaccctgcgccggttgcgtcgtggcctgcgccgggtcgagttggcatcgggaagt
gatcgggactcctcggagttgttgcggctcattctgatcgacgaggatcgtgcgcagtcc
aagcgcctcatgggcaagttgacagacgtcgaagctgcggcactcaatcgcgtgctgtcg
gtccttcgcaaggcccgagtgcctctcgagcgaggtctcggggtcgaagaagttctgtgg
gcagcatggcaggcgacggggctggaacgacgctgggcggctgcgtcggcgcgcggcgga
ccgatcggctcacaggccgatcgagacctcgacgcagtcgtcgcacttttcgacgcggcc
gccaactacgtcgaccggttgccgcgttcgcaactcgccggtttcgtcgactacttgacc
agccaggagataccgaccgactcgcggagccgatcggtcatcactcccgacgccgtcacc
gtggtcagcgctcacgccgcggcgggtcgcgaatgggcggtcgtggcggtggcgggtgtg
caggaggggctctggccgagtttgcgggcacgcggatcgctactgcgtaccgaagcgctg
atcgacctggtcaacggagtctccgacggtagtgactcggctgccgaacgactctcgcga
accgcaccgcttctggccgaagaacgcaggttgttcctggttgcctgtagccgtgctcgt
cgccgtctgctgatcaccgcagtcgaatcggcttcgggggacaccgacttggtgccttcg
cggttcgtggacgaattgatccgtggtgacgcgtactcggacgatccgtcctccgatctc
gacgtcgttgcacccgagaccggggatacccgggttctgtcgctgcctgcactggtcgca
cagcttcgcagcgtcgtgtgtgatcccgacatcgcgcatttcgaccccgagaagcattcc
cgggccgctcgccagttggcacgtctggctgctgccggggtacgcggcgcgcacccggat
cagtggtacggcacagccgagccgagtaccgctgctcccatgtggcagcccgaggacgga
ccggtttcactatcgccgtccaccatcgagcttctcgaaacatgccctctccgatgggtg
ttcgagcgtcatggcggcagcgacggagacaacactcatgcgatcgccggtacgctggtc
cataccttggtgcaggcattggccggccggattccaccggatcaagtcgagaaggcactc
gaaaatgcctgggaatccatcgatctgggatcgcagtggtactcgcgccgcgaactcaat
cgaactcgggagatgctggcgacgttcaccgcctggatgaacgcaactcgcggcgaactg
accgaagtcggcgtcgaggtcgcggtcgagggggtcctcgaaccacgtgaggagggagcg
cctgcggtcaagcttcgtggccggatcgaccggctcgagcgcgacaccgaaggccgtccg
gtggttgtcgacgtcaagactgcgcgaaaccctgtcagcaacgaggccgcgcaatctcac
gcgcagttggcggcgtaccaggtcgcagcggccgaaggtgcgattgccggcgaaccggcc
acacaacccggcggtgcacgcctggtattcgtggccaagtccaacaagaaagacggtgcg
gcgcagcgagttcagccgccgctgacggccgaagccgtcgagatgtggcgagacgtcatc
cacaacgcagcggcagcgacccaagggccgcagtatctggccagggtcaacgacggatgt
agacattgcccggtgcgctcgagttgcccggcacacgacgagggacgacaggtgagtaac
taa
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