Rhodococcus qingshengii: C1M55_12605
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Entry
C1M55_12605 CDS
T05315
Name
(GenBank) aminotransferase class V-fold PLP-dependent enzyme
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
rqi
Rhodococcus qingshengii
Pathway
rqi00260
Glycine, serine and threonine metabolism
rqi00270
Cysteine and methionine metabolism
rqi00450
Selenocompound metabolism
rqi00670
One carbon pool by folate
rqi01100
Metabolic pathways
rqi01110
Biosynthesis of secondary metabolites
rqi01230
Biosynthesis of amino acids
Module
rqi_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
rqi00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
C1M55_12605
00270 Cysteine and methionine metabolism
C1M55_12605
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
C1M55_12605
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
C1M55_12605
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rqi04147
]
C1M55_12605
Enzymes [BR:
rqi01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
C1M55_12605
Exosome [BR:
rqi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
C1M55_12605
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
Aminotran_5
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AUS31866
LinkDB
All DBs
Position
1:2674622..2675773
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AA seq
383 aa
AA seq
DB search
MSEIGVGRFEDYGDSTRSVSAVAREHAAGQPMQLGPIFAAPYQLSADEGSESDTYARASN
PGWRGLESALAALERADHALVMGSGMSAITATLRSVLVAGDTVVVPSDGYYQVRLYANER
LAPLGITVREVSTLQMGDASFVDLLDASPGRVVVVAETPSNPVLDVVDLRVLADACHRSG
ALLIVDNTTATPLGQRPLELGADVVVASGTKALSGHSDLLMGYVATSDAAVSRRIERERL
LSGTVLGPFETWLAHRSLGTAGLRFGRQCDNALALAEMLVNHKAVRSVRYPGLRGDPSYA
TASGQMNRFGGLVSVELDSAQAFHSFVEASALVTAATSFGGIHTTADRRARWGDPVSAGF
VRIACGIEDTADLLADIERALDA
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaatcggtgtgggtcgcttcgaggattacggggattcgacgcgcagcgtgagc
gccgtcgcgcgcgaacacgccgcgggtcagcccatgcaactgggcccgatattcgctgcg
ccgtaccaactttcggcggacgaaggttccgagtccgatacctatgcacgtgcatcgaac
ccgggttggcgcggactcgaatccgcgctcgcggcgctcgagagagcggaccacgccctc
gtcatgggatcggggatgtccgcgatcaccgctaccttgcgcagcgtcctcgtcgcgggg
gataccgtcgtcgtgccctcggacgggtactaccaagtgcggttgtacgcgaacgagcgc
ctcgcgccgttgggaatcaccgttcgcgaggtttcgactctgcagatgggcgacgcgagc
ttcgtagatctgctcgacgcgtcaccgggccgcgtggtcgtcgtcgccgagacgccgtcc
aacccggtgctggacgtggtcgaccttcgcgtgctcgccgacgcgtgccaccgttcgggt
gcgctgctgatcgtcgacaacacgaccgcgacaccgctgggtcagcgcccgctcgaattg
ggtgccgacgtcgtggtggccagcggtaccaaggctctcagcgggcacagtgacctcctg
atgggttacgtcgccacctccgatgcggcagtgagtcggcgaatcgagcgtgagcgactt
ctctcgggaacggtgctcggccccttcgagacgtggcttgcgcaccggagcctcggcacg
gcaggcctgcgattcgggcgtcagtgcgacaacgcgctggcgcttgccgagatgttggta
aatcacaaagcagtccggtccgttcgttaccccggccttcgcggtgacccgtcctatgca
acggcatccggtcagatgaatcgatttggcggattggtgagcgtcgagttggattcggct
caggccttccactcgttcgtcgaagcgagcgctctcgtcacggctgctaccagcttcggc
gggatccacacgacggcggatcgccgtgcgcgctggggcgatccggtcagtgcggggttt
gtccgaatcgcttgtggcatcgaggacaccgccgatctcctggccgacatcgagcgcgca
ctcgacgcgtaa
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