Rhodococcus qingshengii: C1M55_12800
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Entry
C1M55_12800 CDS
T05315
Name
(GenBank) RNA-binding transcriptional accessory protein
KO
K06959
protein Tex
Organism
rqi
Rhodococcus qingshengii
Brite
KEGG Orthology (KO) [BR:
rqi00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
C1M55_12800
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
S1_RRP5
HHH_7
YqgF
T2SSK
HHH_6
Motif
Other DBs
NCBI-ProteinID:
AUS31900
LinkDB
All DBs
Position
1:2717069..2719408
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AA seq
779 aa
AA seq
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MILKTVNQRIAEELDVREGQVAAAVDLLDGGATVPFIARYRKEVTGTLDDAQLRLLDERL
RYLRELDDRRDAVLTEIDSQGKLDDQLRGQIMLAETKARLEDIYLPFKPKRRTKAQIARE
AGHEPVADALIGDPTTDPAQYSDEQLDGARSILVERFAEDADLVGELRELMWNRGQVVSS
VRKGKETDGSKFADYFEFSEPFSKLPSHRILAVLRGEKEEVLSLNMAADTEELAPGERTV
YEGRIASRFEIADRGRAADGWLLDTVKWAWKTKFAVTLGIDTRMRLRQSAEKDAVDVFAT
NLKDLLLAAPAGARPTMGLDPGFRTGTKVAVVDGTGKVVAYETIYPHQPQNKWDAALATL
AGLVAEHGVELIAIGNGTASRETDTLATELIKKTGAPNLTKIVVSEAGASVYSASAYASQ
ELPDLDVSIRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDITESLLSRSLDAVVEDAV
NSVGVDVNTASVPLLARVSGIAGSLAESIVAHRDQNGPFKSRKGLKDVSRLGPKAFEQCA
GFLRITDGDDPLDASSVHPEAYPVVRKIVASAGGDVRTVIGNSQALRSVKASDYVDERFG
LPTVTDIISELEKPGRDPRPEFKTATFAAGIEKVAHLKPGMTLEGVVTNVAAFGAFVDIG
VHQDGLVHVSAMSHNFVKDPREVVKSGDVVKVKVLEVDEARQRIGLTLRLDDEVGAPRKS
EGQRGGQPQRQGQPQGQRQGQGQQRGNGGRQGGREQRPDNRAPAAGSMADALRKAGFGK
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
gtgattctcaagaccgtgaaccagcgcattgccgaggaactcgacgtccgcgaaggccag
gttgcagcagcagtcgaccttctcgacggcggagccacggtgcccttcatcgcccggtac
cgcaaggaagtcaccggcacgctcgacgacgcccagctgcgactcctggacgagcggctg
cggtatctccgcgagctcgacgaccgtcgtgacgccgtgctcacggagatcgactctcag
ggcaaactcgacgatcaactgcgcggtcagatcatgctggccgagacgaaagcgcggctg
gaggacatctacctccccttcaagccgaagcggcgcaccaaggcgcagatcgcccgcgag
gccggccacgagcccgtcgccgatgctctcatcggagatcccaccaccgatcccgcgcag
tattcggacgagcaactcgacggtgcccggtcgatcctcgtcgagcgcttcgccgaggac
gccgatctggtcggtgaattgcgtgagctgatgtggaatcgcggccaggtcgtctcctcg
gtccgcaagggcaaggaaaccgatggctcgaagtttgctgactacttcgagttctcggaa
ccgttctccaaattgccctcgcaccgcatcctcgccgtcctgcgcggcgagaaggaagaa
gtgctgtcgctcaacatggcggcagacaccgaagaactcgcgccgggggagcgcacggtc
tacgaaggccgcatcgcgtcgcggttcgagatcgccgaccgtggtcgggccgccgacggg
tggcttctcgacaccgtcaagtgggcgtggaagacgaagttcgccgtcacgctcggtatc
gacactcggatgcgtctgcggcagtcggccgaaaaggacgccgtcgacgtcttcgccacc
aacctcaaggatctactcctcgcagctcccgccggcgcccgacccaccatgggactcgac
cccggattccgcaccggaacgaaggttgccgtcgtcgacggaaccggcaaagttgttgcc
tacgagacgatttacccgcaccagccgcagaacaagtgggacgcggctctcgcgacgctt
gccggactggtcgccgaacacggcgtcgaactgatcgccatcggcaacggcacggcctca
cgcgagaccgacacgctcgctaccgaactgatcaagaagaccggcgcgcccaacctgacc
aagatcgtcgtctccgaggcaggcgcatcggtgtactcggcttcggcctacgcgtcgcag
gaacttcccgacctcgacgtctcgattcgcggtgcggtgtccattgcgcgtcgcttgcag
gatccgttggcggagttggtcaagatcgatcccaagtccatcggcgtcggtcagtaccag
cacgacatcaccgaatcgctgctctcgcgttccctcgacgccgtcgtcgaggatgccgtc
aactcggtcggcgtcgacgtcaacaccgcgtccgtgccgctgcttgctcgggtgtccgga
attgcaggatcccttgcagagagcatcgtcgcgcatcgggaccagaacggtccgttcaaa
tcccgcaagggtctcaaggatgtctcccgcctgggacccaaggcattcgagcagtgcgca
ggcttcctgcggatcaccgacggcgacgaccctctcgacgcgtcgagcgtccacccggag
gcatatccggtggttcgcaagatcgtcgcgagtgcaggcggggacgtgcgcaccgtgatc
ggaaactcgcaggcacttcgatcggtcaaggcgtccgactacgtcgacgagcgattcggt
ctaccgaccgtcaccgacatcatctccgagttggagaagccgggacgagatccacgaccc
gaattcaagaccgcaacctttgccgcaggtatcgagaaggtcgcgcatctcaagcccggc
atgaccctcgaaggcgtggtcaccaacgtcgcagccttcggtgccttcgtcgacatcgga
gttcatcaggacggtctggttcacgtctcggcgatgtcacacaacttcgtcaaggaccca
cgcgaggtcgtcaagtcaggtgacgtcgtcaaggtgaaggtcctcgaagtggacgaggca
cgccaacgcatcgggctgacgcttcgtctcgacgacgaggtgggagcgccccgcaagtcc
gaaggccagcgaggtgggcaaccccagcgtcagggccagccgcagggccagcgtcagggg
caggggcagcaacgaggaaatggcggacgccagggcggacgcgagcagcgaccggacaac
cgcgcgcctgctgccgggtcgatggccgacgctctgcgcaaggcgggcttcggcaagtaa
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