Rhodococcus qingshengii: C1M55_13360
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Entry
C1M55_13360 CDS
T05315
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rqi
Rhodococcus qingshengii
Brite
KEGG Orthology (KO) [BR:
rqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rqi03016
]
C1M55_13360
Enzymes [BR:
rqi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
C1M55_13360
Transfer RNA biogenesis [BR:
rqi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
C1M55_13360
Prokaryotic type
C1M55_13360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AUS31994
LinkDB
All DBs
Position
1:2829936..2830856
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AA seq
306 aa
AA seq
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MSAREKPSSGLVGAGILIVDKEAGITSHDVVARCRKLLNTRKVGHAGTLDPMATGVLVLG
VERATKLLGLLALTTKAYSATIRLGAATDTDDAEGEVLTSADASQVTDAEIAAIVATLTG
DIKQIPASVSAIKVDGQRAHALVRAGETVELAPRPVTVSTFEVLARRDVPGGFVDLDVDV
ECSSGTYIRSLARDLGRELGVGGHLTALRRTRVGPFTLEHARTLEDLADQPGVSLDIDQA
AQTAFPHRQITAEEAEAISQGRWLEPIGMKGICAAIDPTGHTIALLQEKGRRASSVMVVR
PATLRG
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
gtgtcagctcgtgaaaagccttcctccggtcttgtcggcgccggaattctgattgtcgac
aaagaggcgggtatcaccagccacgacgtggtcgctcggtgccgcaagttgttgaacacc
cggaaggtgggacacgccgggacgctggatcccatggcgaccggtgttctcgttctcggc
gtcgagcgtgcgaccaagttgctcggactcctggcgctgacaaccaaggcgtactcggcg
accattcgcctcggggcagcgacggacacggacgatgccgagggggaggtcctgacctcc
gcagacgcttcgcaggtgacggacgcggagatcgcggcgatcgtggccacgctgaccggg
gacatcaagcagatcccggcaagcgtgagcgctatcaaggtggacggtcagcgcgcacat
gctctggtgcgtgcgggagaaaccgtcgagctggcgccgcgcccggtaacggtgtcgact
ttcgaggttctggctcggcgcgatgtcccgggtggcttcgtcgatctggacgtcgacgtg
gagtgctcgtccggtacgtacatccgctcgcttgcccgcgacctcggtcgtgaattgggc
gtcggcggtcatttgacggcattgcgccgcacccgcgtcgggccgttcactctcgaacat
gcgcgcacgctcgaagatctcgcggatcagccaggtgtgagcctcgacatcgatcaggcc
gcgcagacggcttttccgcatcggcagatcacggcggaggaagccgaggcgatcagccag
gggcgctggctcgagccgatcgggatgaaggggatctgtgcggcgatcgatcccaccggt
cacacgattgcgcttctgcaggagaagggtcgacgcgccagttcggtgatggtcgtgcga
ccggcgacgcttcgcgggtga
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integrated database retrieval system
