Rhodococcus qingshengii: C1M55_13385
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Entry
C1M55_13385 CDS
T05315
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
rqi
Rhodococcus qingshengii
Pathway
rqi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rqi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C1M55_13385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rqi03019
]
C1M55_13385
03016 Transfer RNA biogenesis [BR:
rqi03016
]
C1M55_13385
Enzymes [BR:
rqi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
C1M55_13385
Messenger RNA biogenesis [BR:
rqi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
C1M55_13385
Transfer RNA biogenesis [BR:
rqi03016
]
Prokaryotic type
tRNA degradation factors
C1M55_13385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
KH-I_KHDC4-BBP
RNase_PH_C
KH_PNO1_2nd
KH_2
KH_KhpA-B
KH_NusA_1st
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
AUS31997
LinkDB
All DBs
Position
1:2834050..2836320
Genome browser
AA seq
756 aa
AA seq
DB search
MTENSVVEVDEGVFESTAVIDNGSFGTRTIRFETGRLAQQAAGAVVAYLDDETMLLSATS
ASKHPKEHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVD
GLRNEIQVVVTVMSLNPQDLYDVVAINAASASTQIAGLPFSGPVGGVRVALIVSDENKTG
QWVAFPTVDQLENAVFDMVVAGRVVSGSGDDADVAIMMVEAEATDNVIAKIADGAQAPTE
AIVAEGLEAAKPFIARLCAAQAALASKAAKPTGDYPVFPAYQDDVFAAVEAAASEKLNAA
LTIAGKQERDDKTDEVKVEVLEQVAPNFEGREKELGAAFRSLTKKLVRQRILRDQFRIDG
RGVTDIRSLSAEVAIIPRAHGSALFERGETQILGVTTLDMVKMAQQVDSLGPETTKRYMH
HYNFPPYSTGETGRVGSPKRREIGHGALAERALMPVLPSVEEFPYAIRQVSEALSSNGST
SMGSVCASTLALLNAGVPLRAPVAGIAMGLVSDQVDGETRYVALTDILGAEDAFGDMDFK
VAGTKDFVTALQLDTKLDGIPSQVLAGALSQAKDARTTILEVMAEAIDTPDEMSPFAPRV
TAIKVPVDKIGEVIGPKGKMINSITEQTGANISIEDDGTVFVGATDGPSAQAAIDMINAI
ANPQLPKVGERFLGTVVKTTAFGAFVSLLPGRDGLVHISKLGSGKRIAKVEDVVNVGSKI
RVEIADIDARGKISLIPVEEGNDEAAAPAADEAASE
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgacagagaattccgtagtagaggtcgacgaaggcgtgttcgaatccaccgccgtgatc
gacaacgggtccttcggtacccgcaccatccgtttcgagaccggacgccttgctcagcag
gccgccggcgccgtcgttgcttacctggacgacgagaccatgctgctgtccgccacgagc
gccagcaagcaccccaaggagcacttcgacttcttccccctgacggtggacgtcgaagag
cgtatgtacgcagcgggccgcatccccggttcgttcttccgtcgtgagggacgcccctcc
accgacgcgatcctgacttgccgcctcatcgaccggccgctgcgcccgtccttcgtcgac
ggtctccgtaacgagatccaggtcgtcgtcacggtcatgagcctcaacccgcaggatctg
tacgacgtcgtggccatcaacgccgcttccgcgtcgacgcagatcgcgggcctgccgttc
tccggacccgtcggtggcgtgcgcgttgcactcatcgtctcggacgagaacaagaccggc
cagtgggttgcattcccgacggtcgatcagctcgagaacgccgtcttcgacatggtcgtc
gccggccgcgtcgtttccggtagcggtgacgacgccgacgtcgcgatcatgatggtcgag
gccgaggccaccgacaacgtcatcgcgaagatcgccgacggcgctcaggcaccgaccgag
gccattgtcgccgagggcctcgaggccgccaagccgttcatcgcacgcctgtgcgctgca
caggcagcacttgcatccaaggctgcaaagcccacgggtgactacccggtcttcccggcg
taccaggacgacgtttttgctgccgtcgaggctgctgcgtccgaaaagctcaatgccgca
ctgacaatcgccggcaagcaggaacgcgacgacaagaccgacgaggtcaaggtcgaggtt
ctcgagcaggttgcacccaacttcgaaggccgcgagaaggaactgggagcagcgttccgc
tcgctcaccaagaagctggttcgccagcgcatcctgcgcgatcagttccgcatcgacggc
cgcggcgtcacggacatccgttcgctgtccgccgaggtcgcgatcatcccgcgcgcacac
ggctccgcactgttcgagcgtggcgagacccagatcctgggtgtcaccactctcgacatg
gtgaagatggctcagcaggtcgactcgctcggtcccgagaccaccaagcgctacatgcat
cattacaacttcccgccgtactccaccggtgagacgggccgcgtcggttcgccgaagcgt
cgcgaaatcggtcacggtgcactcgccgagcgcgctctcatgccggttctgcccagcgtc
gaagagttcccttacgcgattcgccaggtctccgaggctctgagctccaacggttccacc
tcgatgggctcggtgtgcgcgtccacgctcgcactgctcaacgccggtgtgccgcttcgc
gctccggttgccggtatcgccatgggtctggtctccgaccaggtcgacggcgaaacccgc
tacgtcgcgctgaccgacatcctcggcgccgaagacgccttcggcgacatggacttcaag
gtcgcaggtaccaaggacttcgtcacggccctgcagctggacacgaagctcgacggcatc
ccgtcgcaggtcctcgccggtgcactctcgcaggcgaaggacgcacggaccacgatcctc
gaggtcatggcggaagccatcgacaccccggacgagatgagcccgttcgctccccgcgtg
acggccatcaaggtccccgtcgacaagatcggtgaggtcatcggccccaagggcaagatg
atcaactccatcaccgagcagaccggtgccaacatctccatcgaagacgacggcaccgtg
ttcgtcggcgccaccgatggaccgtctgcacaggccgcgatcgacatgatcaacgccatt
gccaacccgcagctccccaaggtcggcgagcggttcctgggcacggtcgtcaagaccacc
gccttcggtgccttcgtttcgctcctgccgggacgcgacggactggtgcacatctcgaag
ctgggcagcggtaagcgcattgccaaggtcgaagacgtggtcaacgtcggatccaagatt
cgcgtcgagatcgctgacatcgacgcacgtggcaagatctcgctgatcccggtcgaagag
ggcaacgacgaggctgccgctccggccgccgacgaggctgcttccgagtag
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