Rhodococcus qingshengii: C1M55_13960
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Entry
C1M55_13960 CDS
T05315
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
rqi
Rhodococcus qingshengii
Pathway
rqi00300
Lysine biosynthesis
rqi00470
D-Amino acid metabolism
rqi01100
Metabolic pathways
rqi01110
Biosynthesis of secondary metabolites
rqi01120
Microbial metabolism in diverse environments
rqi01230
Biosynthesis of amino acids
Module
rqi_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rqi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
C1M55_13960
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
C1M55_13960
Enzymes [BR:
rqi01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
C1M55_13960
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
CntK_N
CusF_Ec
Motif
Other DBs
NCBI-ProteinID:
AUS35350
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All DBs
Position
1:2964667..2965536
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AA seq
289 aa
AA seq
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MDFSKGHGTQNDFVVLPDLDVRIDLEPARVSALCDRQRGLGADGILRVARAGALADAGVL
GALPDGVAAEDWFMDYRNSDGSIAEMCGNGVRVFAHYLKASGLESKDEFVVGSRAGARPV
VVHGYDATHGDVTVAMGPIKDLGTSSATIDGRVFAGVGIDVGNPHLACVDEHVTAEVLSA
LDLSVSPGFDPGFFPHGVNIEIVTPIHDGGVHMRVHERGVGETRSCGTGTVAAAAAALRY
DGRDEGSVLVRVLGGEVQVTVEGGKGSLRGPSVLVANGTISDAWWQSLV
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggatttcagtaagggccacggcacgcagaacgacttcgttgttctccctgacctcgac
gttcggatcgatctcgagccggcgcgagtttcagcgttgtgtgatcgtcagcgtggcctc
ggcgccgacggcatccttcgtgtcgcccgggcaggcgcacttgcggacgcgggcgtgctc
ggtgcgctgcccgacggcgtcgctgccgaagactggttcatggactaccgcaacagcgac
ggctccatcgccgagatgtgcggaaacggcgttcgcgtattcgcccactatctcaaggcc
tcgggcttggagagcaaggacgagttcgtggtcggcagccgcgccggagcgcgtccggtc
gtggtgcacggctacgacgccacgcatggtgacgtgaccgtggcgatgggcccgatcaag
gacctcggcaccagctcggcaacaatcgacggccgcgtcttcgccggcgtcgggatcgac
gtcggtaatccgcatttggcgtgtgtcgacgagcacgtgacggcagaagtgttgagtgcg
ctcgatttgagtgtttctccgggcttcgatcccgggttcttcccgcacggggtcaacatc
gagatcgtgacgccgatccacgacggtggggtccacatgcgcgtacacgagcgtggtgtg
ggcgagactcgttcctgcggaaccggaacggtcgcagcggcggccgcggcgctgaggtac
gacggccgcgatgaaggctcggtactggtgcgcgtgctcggtggcgaggtgcaggtcacc
gtcgaaggcggcaaagggtcgttgcgggggccctcggttctggtggcgaacgggacgatc
agcgatgcctggtggcaatcgcttgtgtga
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