Rhodococcus qingshengii: C1M55_15265
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Entry
C1M55_15265 CDS
T05315
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
rqi
Rhodococcus qingshengii
Pathway
rqi03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
rqi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
C1M55_15265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rqi03400
]
C1M55_15265
DNA repair and recombination proteins [BR:
rqi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
C1M55_15265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Zn_Ribbon_TF
Motif
Other DBs
NCBI-ProteinID:
AUS32324
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All DBs
Position
1:complement(3245587..3246435)
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AA seq
282 aa
AA seq
DB search
MGGMRSIWKGSIAFGLVNVPVKVYSATEDHDIRFHQVHAKDGGRIKYNRVCSECGNTVQF
ADIDKAYDSEDGSRVILSDEDFNKLPAAEKHEIPVLEFVPNDQIDPILFEKSYFLEPDSA
SPKAYVLLSTVLTESDRTALVHFTLRQKTRLAAMRARDGVLVIQTLLWPDEVRAAEFPSL
DDVEKPKAKELKMAQTLVESMAGDFDPTEFTDDYQLQLRQLLDEMIENGGKKVIPAAEVD
QEGTDAEVVDLVAALQRSVDEAKSNASKAGSSKSTTPRKKRA
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgggaggcatgcgctcgatttggaaaggctcgatagccttcggtctggtcaacgtcccg
gtcaaggtgtactcggcgaccgaggaccacgacatccgatttcaccaggtccatgcaaaa
gacggtggccgcatcaagtacaaccgtgtgtgttccgagtgcggaaacacggttcagttc
gcggacatcgacaaggcgtacgactcggaagacggatcgcgcgtcatcttgagcgacgag
gacttcaacaaactcccggccgcggagaagcacgagattccggtgctggaattcgtgccg
aacgatcagatcgatccgatcttgttcgagaagagttacttcctcgaacccgattcggcg
tcgccgaaggcgtacgtcctgctttcgactgtgctcaccgagagtgatcgaacggcactg
gtgcatttcactctgcgacagaagacgcgcctggccgcgatgcgcgctcgcgacggcgtc
ctggtgatccagacgttgctgtggcccgacgaagttcgcgcagcagagttcccttcgctc
gacgacgtggagaagccgaaggccaaggaactgaagatggcgcagacgctcgtcgagagc
atggcgggcgatttcgatccgaccgagttcaccgacgactaccagctccaactgcggcag
ttgctcgacgagatgatcgagaacggcggcaagaaggtcatccccgccgccgaggtcgac
caagagggcaccgatgcggaggtggtcgacctggttgccgcactgcagcgcagtgtggac
gaagcgaagtcgaacgcctccaaggccggctcgtcgaagtcgaccacaccgaggaagaaa
cgagcctga
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