Rhodococcus qingshengii: C1M55_16265
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Entry
C1M55_16265 CDS
T05315
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
rqi
Rhodococcus qingshengii
Brite
KEGG Orthology (KO) [BR:
rqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rqi03036
]
C1M55_16265 (xerD)
Chromosome and associated proteins [BR:
rqi03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
C1M55_16265 (xerD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Motif
Other DBs
NCBI-ProteinID:
AUS32505
LinkDB
All DBs
Position
1:complement(3485145..3486068)
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AA seq
307 aa
AA seq
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MLARQVDSYLDHLAVERGSARNTLLSYRRDLNRYAEYLHGRGIDDVAGVTENDVTEFVTH
LRLGDKDAGVVPLAASSAARTLIAVRGFHKFSAAEGLVGVDVARTVKPPTPGRKLPKALP
LDDVIALLDASGGGAAGDGPRDLRDRALLELLYSTGARITEAIDLDVDDIDTETRSVLLK
GKGGKQRIVPVGRPAIAAVDAYLVRGRPSLATRGVPALFLNARGGRLSRQSAWQILQDAA
ASAGIKADVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYTLVTVTALREVWA
QAHPRAR
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
gtgcttgcccgacaggtggactcgtatctcgaccatctagcggtcgagcgaggatctgcg
cgcaatactctactttcctatcgccgcgacctgaatcggtacgcggagtacctgcacgga
cgcggcatcgacgacgtcgcgggcgtgacggagaacgacgtcaccgaattcgtgacacat
ctgcgcctgggtgacaaagatgccggcgtcgtaccattggcggccagttcggcagcacgc
accctgatcgcggtccgcggattccacaagttctccgccgccgagggcctggtcggtgtc
gacgtggcccgaacggtcaagccgccgacgcccggacgcaagctgcccaaggccctgcct
ctcgacgacgtgatcgccctgctcgacgcttcgggtggcggtgcggccggtgacgggccc
cgcgacctgcgggatcgcgctctgcttgagctcctgtactcgaccggagcgcgaatcacc
gaggcgatcgatctggacgtcgacgacatcgataccgaaactcgttccgtgctgctcaag
ggcaagggcggcaagcagcggatcgtccccgtcggcaggccggcgatcgccgccgtcgac
gcgtatctcgtccgcgggcgccccagcctggcgacgcgcggtgttcctgccctctttctc
aacgcgcgcggtggacgcctctcgcgtcaaagcgcgtggcagatacttcaggatgcggcg
gcgtcggccgggatcaaggcggacgtctcaccccacacgctcaggcactcgtttgccaca
cacctgctcgacggcggcgcggacgtacgcgtcgtgcaggaacttctcggtcacgcttcg
gtaaccacgacgcagatctacacgctggtcaccgtcaccgcgctgcgcgaagtgtgggct
caggcacacccgcgtgcccgttag
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