Rhodococcus qingshengii: C1M55_17680
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Entry
C1M55_17680 CDS
T05315
Name
(GenBank) hypothetical protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rqi
Rhodococcus qingshengii
Pathway
rqi03030
DNA replication
rqi03430
Mismatch repair
rqi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rqi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C1M55_17680
03430 Mismatch repair
C1M55_17680
03440 Homologous recombination
C1M55_17680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rqi03032
]
C1M55_17680
03400 DNA repair and recombination proteins [BR:
rqi03400
]
C1M55_17680
Enzymes [BR:
rqi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C1M55_17680
DNA replication proteins [BR:
rqi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C1M55_17680
DNA repair and recombination proteins [BR:
rqi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C1M55_17680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
GIY-YIG
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
AUS32753
LinkDB
All DBs
Position
1:3820934..3822760
Genome browser
AA seq
608 aa
AA seq
DB search
MRVGFRVCTLEFVSGGTSTVCGVSPASAREFPSPPPFSDGEKFDVGRQLSFDELDTPLSE
TTFVVVDLETTGGSADQDSITEIGAVKIRGGEVLGEMATLVDPGRSIPPYIVELTGITTA
MLIGAPPIERVLPAFLEFAEGAVLVAHNAPFDIGFLKAAASRSARPWPAFRVLCTVKLAR
RVLTRDEAPSVKLSALAHLFQVTTQPTHRALDDARATVDVLHGLIDRVGNQGVHSYSELV
DYLPNISSHQRAKRSFAANLPRSPGVYLFRGPSDEALYIGTATDLRRRVRNYFTGSETRG
RMKEMVALATRVDHVECAHALEAGVRELRLLSAHAPPYNRRSKFPKRGWWITLTDEAFPR
LSVVRTPTADSIGPFTSRADAVDVADTVAEFSRLRTCTKRLGRGAVHGPDCPARELGACP
ASWTPEINAEDYAAAPEAVRGFFRGTNDAPLQQMQARIDELSAHALFENAARLRDRTVAV
ATAVRRTQRLAAVAAIEQLVLARPTGDGGWELSVIRSGRLASAGLARRGTHPMPVVDAIT
AAAETVLPDDAPFRGASPEELGLIARWLSSDGVRIVSATSGYVEPVSGAGKWEAWCRLAR
AGTESEHR
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
gtgcgggtcggattccgtgtctgcactctcgaattcgtgtcggggggtacttctactgtc
tgcggtgtgagtcccgcctcggcccgagaatttccgtctccgcccccgttctccgacggg
gagaagttcgacgtcgggcggcaactgagcttcgacgaactggacacaccgctgagcgag
acaacatttgtcgtcgtcgacctcgagaccacagggggcagcgccgaccaggactccatc
accgagatcggcgccgtcaagatccgcggcggcgaggtactgggcgaaatggcaacactc
gtcgaccccggccggtcgattccgccctacatagtcgaactgaccggaatcaccacggcc
atgctgatcggcgcacctcccatcgaacgtgtcctgcctgcatttctcgagttcgccgag
ggcgcggtgctggtggcacacaacgcgccgttcgacatcggtttcctcaaagcagcggcg
tcacgcagcgcgcgcccgtggcctgcgttccgtgtcctgtgcaccgtcaaactcgcccgg
cgcgtactcacacgcgacgaagcaccttcggtgaaactctccgcactcgcccatctcttc
caagtgaccacccagccgacgcaccgggctctcgacgacgcgcgtgcgaccgtcgacgtc
ctccacggactgatcgacagggtcggaaaccagggtgtccacagttacagcgaactggtc
gactacctgcccaacatttcctcgcatcaacgggccaaacggtccttcgccgcaaacctg
ccgcgaagccccggtgtctaccttttccgcggtccttccgacgaagccctctacatagga
actgctaccgaccttcgacgccgcgtccgcaactacttcaccggttcggagacccgcggc
cggatgaaggaaatggtcgcgctggccacccgcgtggaccatgtcgagtgcgcgcacgct
ctcgaagccggggtgcgtgaactacgactgctgagcgcgcatgcgccgccgtacaaccgt
cgctccaagtttcccaagcgaggttggtggatcaccctcaccgacgaggcgtttccgaga
ctgtccgtggttcgcacgcccacggccgattcgatcggcccgttcacctctcgcgccgac
gcagtcgacgtcgccgacaccgtcgcagagttcagtcgtctgcgcacgtgtaccaagcgt
ctcggacgcggcgccgttcacggccctgactgccccgctcgcgaactgggggcgtgtcca
gcctcctggaccccggaaatcaacgcagaggactacgcggccgcccctgaggccgtgcgt
ggattcttccgaggaaccaacgacgctcccctccaacagatgcaggcccggatcgacgag
ctgtccgcacacgcgttgttcgagaatgctgcgcgtctgcgtgaccgaacggtcgcagtc
gccaccgcagtgcggcgcactcagcgactcgccgcagtcgcggcgatcgaacaactcgtt
ctcgcccgccccaccggagacggcggctgggagctgtcggtgatccggtccgggcgtctc
gcgtccgccgggctcgccagacgtgggactcacccgatgcccgtcgtcgacgccatcacc
gcggcggccgaaaccgtcctaccggacgacgccccgttccgcggcgcgtcacccgaagaa
ctgggactgatcgcaaggtggctctcgtcggacggtgtccgaatcgtgtcggcgacatcc
ggatacgtcgaacctgtgagcggcgccggcaagtgggaagcctggtgccgactcgcccga
gccggaaccgaatccgaacatcgatga
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