Rhodococcus qingshengii: C1M55_19030
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Entry
C1M55_19030 CDS
T05315
Name
(GenBank) peptidase
KO
K20276
large repetitive protein
Organism
rqi
Rhodococcus qingshengii
Pathway
rqi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rqi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
C1M55_19030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5979
Big_8
DUF7601
Gram_pos_anchor
Candida_ALS_N
Motif
Other DBs
NCBI-ProteinID:
AUS32983
LinkDB
All DBs
Position
1:4099834..4104441
Genome browser
AA seq
1535 aa
AA seq
DB search
MIVAVLALVISSFSFVQVASADDIGTSTTTGPTTTVPTTTKPPATTTEAPLKTTAPPTST
SESPTSAKPPITTTAPPSTTSVAAQRLAARGVNPGIDVKITDVQVEGKNDQQITVGDSVT
VKGIWDASSASPQPGDQFTIEFPGELKLQSNPTIALEGDDGTVWGTCDLAASTNLMTCVL
SDAVADRPDEVKGDFFVYTKAVEYTTSETVDFTINNKVTQVDLPGTGGITDGRVIGESTK
SGKLQDNKQSVRWTIDIPGADLAKLDTGNTGSVTLSDELSDNMKVCAGSLLNAKLWSGRP
GDLKETPGGVTVTQPDAGVQVTININNGGPFEGSKLYRIEYTSCTTSGVVDLKGTQYTNS
VTIGDNTVASDGVGQDYAPQTEPWKGGYLDGGKRNTEAVWTIVVPGTDIAANNHKIDITD
TFGGPHAVCASGVQVVIEKSDYLPGRENEPNYRTPAAGFTIAPIGAVAGASTFTAAITVD
NPDTFNEEQYYYFTYRTCLTTTEVPDSEDHLTNSAVVNKTSITGKTEGPGFTSGKNGAIN
TTSQTIGGVEQPAGTTLNWTVEISGHDLEGLTEPAVINDRFSPNMTVCEIGGDLKSNLNL
KVVAQDFFDGNKKRDITDATSVARADGGFDLTLPRDADGYSRQTKYLVSYTLCTSSGGLD
QRDTEYSNTLTYAGKQTLSKSVKQEWGGGGTGQGVSRGSFSLLKEIAPFSEKFPEDTEFT
VKVEEFAPGQDPATDAPVSSYEIKVKADGTPVSGINPRGTGWQIRLSEINLPTVDGVYFE
RGTFRPSEGVTLNGDRTEALVTITPKSNVGVTLLNKASLGSARITKSVIGDGARTGLEAF
VVNAEIAFGDDAAGNELRQFTLKDGQHYDLGKLPIGAKVTFTEVQPTNTDLVTWSLPVIS
PKTLTIGTDASANTVSVTNEATITQGTFEVSKKLTGPKASDKAVPASFDVIATWLDTDDN
PQSKTLSLPSDGTPVPFGENLPGGTEVTLTELVPANGDGLAYGVPAYSGNVRISPDNAAV
VTIGKDLRKIEVSNFVDVNDGTLRIAKQVGGEAAEAVGDDVEFTVEARWRDGVEYRTQVL
SVKQGQTTPLGVDLPVGTEVTFTETGRPDVDGVEWGTISWGTSPEGESWLHSNLDGTATG
IVSDDPTDGRLITLSNEALWKFGSVEFTKFILDADGNPVRAPEADLPDSATFEVRIDGID
PALPAGTDFPAVGQTITLDAANDWSWTSDEVVPRNTVITFSEVDPKPLAGIDWARPYYYV
SADAGDADYRDTVKAVAGEKAVVEIHNRPIPTTEVDIDKIVTGPKGSQVAKDGSTIFQVT
ATWTDIDNEARSCVLDVKPGASVTPTAQCDAAVIDGRVQFPLNTDITFTETGAHTDVTNV
KWGEVIWGVKEGKADVSKIDGEPTATSVELTGEANKSVVLGLENNTSSNGLIIIPIPIPL
PPWEIPTWPGSEVPGGPGTDVSTPGNNAPGNNGGGHNGAPGTPAPGNPAQAKPDQSSSLP
VTGANVIWLAGLALALIGGGAWLTLRNRKRAPGQE
NT seq
4608 nt
NT seq
+upstream
nt +downstream
nt
atgatcgttgcggtcctggcgctggtcatatcgtcgttctcattcgtccaagttgcctca
gcagatgacatcgggacctcgaccaccacaggtccgaccaccacagttccgaccacaacg
aagccgcccgcgactacgacggaggcgccactgaaaacgacggcgccgcctacttccacg
tcggagtcacccacttctgcgaaaccgccgatcacaaccacggcgcccccgtctacgact
tctgtggcggcgcagcgactggccgcacgcggagtcaatcccggcatcgatgtgaaaatc
accgacgtccaggtcgagggaaagaacgaccagcagatcacggtcggggactccgtcacg
gtgaagggcatttgggacgcgtcaagcgcgagtccgcagccgggcgaccagttcaccatt
gaattccctggcgagctgaagcttcagtccaacccgacgatcgcgctggagggcgacgat
gggacggtttggggcacatgcgatctggctgcttccaccaatctcatgacctgcgtgctc
tccgacgctgtggcggatcggccggacgaggtgaagggcgatttcttcgtctacacgaag
gcagtcgagtacaccacgtcagagactgtggatttcacgatcaacaacaaggtcacgcag
gtcgacctgcccggcacgggcggcatcaccgacggccgcgtaatcggcgagtcgacgaag
tccggcaaactccaggacaacaagcagtcagtgcggtggaccatcgacatccccggcgca
gatctggccaagttggacacaggcaacaccggttcggtgaccctgagcgacgagctctcc
gacaacatgaaggtgtgtgcgggcagcctgctcaacgcgaagctgtggtccggtcgcccg
ggcgatctcaaagagacccctggcggcgtcaccgtcacccaacccgacgcgggtgttcag
gtcacgatcaacatcaacaacggcgggcccttcgagggcagcaagctctaccgcatcgag
tacacctcatgcacgaccagcggcgttgtggatctcaaggggactcagtacaccaactcc
gtgacgatcggtgacaacacggtggcttcggatggcgtgggacaggactacgcgccgcag
accgagccctggaagggcggctacctcgacggcggtaagcgcaatacggaagccgtctgg
acgattgtggttccgggcaccgacattgccgccaacaaccacaagatcgacatcaccgac
accttcggcggcccccatgcggtctgtgcctcgggcgtgcaggtagtcatcgagaagtct
gactacctcccagggcgggagaacgaacccaactaccgcactcctgccgcaggattcacc
attgctcccatcggcgcagtagccggcgcgagtaccttcaccgcggcgatcactgtggat
aacccggacacattcaacgaagaacagtattactacttcacgtaccggacctgcctgacc
accaccgaggtgccggactccgaggaccatctcaccaactcggcggtcgtcaacaagacg
tcgatcacgggaaagactgagggacctgggttcacgagcggcaagaacggcgcgatcaac
accacgtcgcagacgatcggcggtgtggagcagccggcaggcaccaccctcaattggacc
gtggaaatctccggacacgatctcgagggccttacggaaccggcggtcatcaacgacagg
ttctcaccgaacatgacggtgtgtgaaatcggcggcgatctcaagagcaacctcaatctc
aaggtcgtcgcgcaagacttcttcgacggcaacaagaaacgcgatataaccgacgccacc
tcggtggcgcgcgccgacggcggtttcgatctcaccctccctcgggacgcggacggttac
agccgtcagacgaagtacctcgtcagctacaccctgtgcaccagcagcggcggactggac
cagcgcgacacggaatactccaacaccctcacctatgccggcaagcagacgctgtcgaag
agcgtcaagcaggaatggggcggcggcggcaccggccaaggtgtgtcgcggggctcgttc
tcgcttctgaaggagatcgctcccttctccgagaaattcccggaagacaccgagttcact
gtgaaagtcgaggagttcgcccccgggcaagatccagcgaccgacgccccggtgagctcc
tacgagatcaaggtgaaggctgacgggacacccgtcagtgggatcaacccccgcggaacc
ggctggcagatccgcctgtccgagatcaacctcccgaccgttgacggtgtgtacttcgag
agagggacgttccgcccgtcggagggtgtgacgctcaacggggaccgcaccgaggcgctg
gtgaccatcacgccgaagagcaatgtcggtgtcacactgctcaacaaagcgagcctggga
tcggcgaggatcaccaaatccgtcatcggtgacggagcgcgcacggggctcgaggctttc
gtcgtcaacgcagagatcgccttcggtgacgacgccgccggcaacgagctgcgtcaattc
accctgaaggacggtcagcactacgacctgggcaaattgcccatcggagcgaaagtcacc
ttcaccgaggtccaaccgacgaacaccgacctcgtgacgtggtcgctgccggtgatcagc
ccgaagacgctcaccatcggcaccgacgcgtcggcgaacacggtctccgtcaccaacgag
gccacgatcacgcaaggcaccttcgaagtgagcaaaaagctcacgggcccgaaggcgtcc
gacaaggccgtaccggcgagcttcgacgtgattgccacctggctcgatacggacgacaac
ccgcagagcaagacgctgtctcttccgtccgacggcaccccggttccgttcggcgagaac
ctgccgggcggcaccgaagtcacactgacagagctggttccggcaaacggtgacggtctc
gcctatggcgtgcccgcatactccgggaatgtcaggatcagtccggacaacgcagccgtg
gtgaccatcggcaaggatctgcgcaagatcgaggtgtcgaacttcgtcgacgtcaacgac
ggcactctgcgcatcgcaaagcaggtcggcggtgaggccgccgaggccgtcggcgacgac
gtggagttcacggtcgaggcgcgttggcgcgacggtgtggagtaccgcacccaggtgctg
agcgtcaagcagggacagaccacaccgctcggcgtcgacctccctgtcggcaccgaggtg
accttcaccgagaccggccgtcccgatgtcgacggagtcgagtggggcacgatctcctgg
ggcaccagcccggaaggcgaatcgtggctgcactcgaacctcgacggcaccgcgacgggc
atagtctccgacgacccgaccgacggtcggctgatcacgctgtcgaacgaggcgctgtgg
aaattcggatcggtcgaattcacgaagttcatcctcgacgctgacggcaaccccgtccgc
gcacccgaggccgacctgcctgacagcgcgacgttcgaggtccgtatcgacgggatcgat
ccggcactccccgctggaactgatttcccggcagtgggccagaccatcaccctcgatgcc
gcaaacgactggagctggacgtccgacgaggttgtgccgcggaacaccgtgatcaccttc
tccgaggtcgaccccaagccactggccggtatcgactgggcgcggccgtactactacgtc
tccgcggatgccggtgacgccgattaccgcgacaccgtcaaggcggtggccggtgagaag
gctgtggtggagatccacaaccgcccgatcccgaccaccgaggtggatatcgacaagatc
gtgaccggccccaagggcagccaggtggccaaggacggatccacgatcttccaggtcacg
gctacgtggacggacatcgacaatgaggcgcggtcttgtgttctcgatgtcaagccgggc
gcttcggtcactccgaccgcccagtgcgacgcagccgtcatcgacggccgggtccagttc
ccgctgaacaccgacatcactttcacagaaaccggtgctcacaccgacgtcaccaacgtc
aagtggggtgaagtgatctggggcgtcaaggaaggcaaggcggatgtctcgaagatcgac
ggcgaaccgaccgcaacttccgtcgagctcaccggcgaagcaaacaagtcggtggtcctg
ggactcgagaacaacaccagcagcaatgggctgatcatcatcccgatcccgatcccgctg
ccgccgtgggaaatcccgacatggccgggctctgaagtacccggaggaccaggcactgac
gtgtcgactcccggcaacaacgctcccggcaacaacggtggtggacacaacggtgctccg
ggcacacctgctccgggaaatcctgctcaggccaaaccggaccagtcatcgtccctgccg
gtaaccggcgcgaacgtcatctggctcgccggtctggcgctggcactgatcggcggtgga
gcatggctcaccctgcgtaaccgcaagcgtgcacccggccaggagtaa
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