Rhodococcus qingshengii: C1M55_19470
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Entry
C1M55_19470 CDS
T05315
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
rqi
Rhodococcus qingshengii
Pathway
rqi00300
Lysine biosynthesis
rqi00470
D-Amino acid metabolism
rqi01100
Metabolic pathways
rqi01110
Biosynthesis of secondary metabolites
rqi01120
Microbial metabolism in diverse environments
rqi01230
Biosynthesis of amino acids
Module
rqi_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rqi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
C1M55_19470 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
C1M55_19470 (lysA)
Enzymes [BR:
rqi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
C1M55_19470 (lysA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AUS33056
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All DBs
Position
1:complement(4204670..4206091)
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AA seq
473 aa
AA seq
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MNAHPAGPKHAEQLQAPGLPDRPTSPEAFGELSPQVWPRNASRGDDGEVTLAGVKVGELA
EKYGTPLFVIDEDDFRSRCRDMARAFGPDAKVHYASKAFLCGEIARWVADEGLSLDVCSG
GELAIALHADFPAERIAMHGNNKSVAELAAGVAAGVGHVVLDSSIEIDRLDRVAGEAGVV
QDVLIRLTVGVEAHTHEFISTAHEDQKFGFSLAGGAAIDAVRRVFAAENLRLVGLHSHIG
SQIFDVDGFEVAAHRVIGLLRDVVTEFGVEKTKQISIIDLGGGMGISYIPSDDPPPVDEL
AAKLGHIVRNESALAGLPEPTLAVEPGRAIAGPGTVTLYEVGTIKDVTVGSSLTRRYISV
DGGMSDNIRTSLYGAEYEAKLVSRTSEADPVVARIVGKHCESGDVVIRDTWMPEDVGPGD
LLAVAATGAYCYSMSSRYNLLTRPAVVAVRDGVSRVILRRETVEDLLSLEVSQ
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgcgcaccccgccggccccaagcacgccgagcagttgcaggcccccggcttgccc
gaccgtccgaccagccccgaagccttcggcgaactctcaccgcaggtgtggccgcgcaac
gcttctcgtggcgacgacggtgaagtgaccctcgcgggtgtcaaggtcggtgaacttgcc
gagaagtacggcactccgttgttcgtcatcgacgaggacgacttccgctcgcgctgccgt
gacatggcccgcgccttcggcccggatgccaaggtgcactacgcatccaaggcattcctc
tgtggcgagatcgcacgctgggtcgccgacgaaggcctctcgctcgacgtctgctccggc
ggcgaactggcgatcgcgttgcacgcggacttcccggccgagcgaattgccatgcacggc
aacaacaagtcagtcgccgaactggccgctggtgtcgccgcgggcgtcggacacgtcgtg
ctcgactcgtcgatcgagatcgaccgactcgatcgtgtcgccggtgaggccggtgtcgtt
caggacgtgttgatccgactgaccgtcggcgtcgaagcgcatacccatgaattcatctcc
accgcacacgaggaccagaagttcggtttctcgctggccgggggagcggcgatcgacgcg
gtccgtcgcgtcttcgccgccgaaaacctgcgactggtcggcctgcacagccacatcggt
tcgcagatcttcgacgtcgacggtttcgaggtggcagcgcaccgcgtgatcggtttgctc
cgcgacgtcgtcaccgagttcggagtcgagaagaccaagcagatttcgatcatcgacctc
ggcggcggcatggggatctcgtacatcccctccgacgacccgccgcccgtcgacgaactg
gcagcaaagctcggccacatcgtgcgcaacgagtcagcactggccggattgccggagccg
acgcttgccgtcgaacccggccgcgccatcgccggacctggcacggtgacgctctacgag
gtcggcaccatcaaggacgtcacggtgggtagctcgctgacacgccgctacatcagcgtc
gacggcgggatgagcgacaacatccgcacgtccctctacggtgcggagtacgaagccaag
ttggtttcgcgaacttccgaggctgatcccgtcgttgcacgtatcgtcggtaagcactgc
gagtccggtgacgtggtcattcgggacacctggatgcccgaggacgtcgggcccggtgat
ttactagcggtagcagcgaccggtgcatactgctattcgatgtcgagcaggtacaacctg
ctcacccgcccagccgtggtggcggtgcgtgacggagtctcacgcgtgattctgcggagg
gaaacagtggaagatctgctcagcttggaggtatcgcagtga
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