Rhodococcus qingshengii: C1M55_19970
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Entry
C1M55_19970 CDS
T05315
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rqi
Rhodococcus qingshengii
Pathway
rqi00061
Fatty acid biosynthesis
rqi00071
Fatty acid degradation
rqi01100
Metabolic pathways
rqi01212
Fatty acid metabolism
rqi02024
Quorum sensing
rqi04146
Peroxisome
Module
rqi_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rqi00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
C1M55_19970
00071 Fatty acid degradation
C1M55_19970
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
C1M55_19970
09145 Cellular community - prokaryotes
02024 Quorum sensing
C1M55_19970
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rqi01004
]
C1M55_19970
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rqi04147
]
C1M55_19970
Enzymes [BR:
rqi01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
C1M55_19970
Lipid biosynthesis proteins [BR:
rqi01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
C1M55_19970
Exosome [BR:
rqi04147
]
Exosomal proteins
Exosomal proteins of breast milk
C1M55_19970
Exosomal proteins of breast cancer cells
C1M55_19970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
AUS33144
LinkDB
All DBs
Position
1:complement(4308001..4309794)
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AA seq
597 aa
AA seq
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MSEYSAKAQFTISDNESVVHTVFTHAERTPELTVFSRPKGEVWVDVTAKEFAEQVTGVAN
GLIAAGVQAGDRVALLSATRYEWTLFDFAIWAAGAATVPIYDSSSQGQVSWILGDSEAVI
AIVETGAHEQLFQDAPSTLKAVMQIDDGAVEKLTAQGADVDDTELKKRLAGIKADDLASL
VYTSGTTGRPKGCILTHRNFLSEVRGILTASIGKVAVPGNRVLTFLPLAHVLARAVSLAT
FEAGASQAHWSDFATITTQFERYKPNTILGVPRVFEKVRDGAARKAESGGKIPGAIFAFA
ETTAKEYSQALDKGGPSLILKAKHAVADKLVYSKLREALGGECWFAISGGGALTPELGHF
FRGLGVPIYEGYGLTETTAAHCVNVPGAQKIGTVGQPMGGNGVRIAEDGEIELNGGVVFK
GYWKNDKATEESFVNGWMRTGDLGELDSDGYLSITGRKKDLLVTAGGKNVSPGPMEDRIR
SHSIVSQAVVVGDGKTYITALLTVDPEVFEKWKAENGKPSGATVAELRDDKDLRAELQKA
VDDANAAVSHAESIKKFVILDRDLTEEDGEMTATLKIKRNVVVDRFSKEIQGMYAKS
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgagtacagcgccaaagcccagttcaccatctccgacaacgagtccgtggtgcac
accgtcttcactcacgccgagcgcacgcccgaactgacggtgttctcccgccccaagggc
gaggtttgggtagacgtcacagccaaagagttcgccgagcaggtcaccggcgtcgcaaac
ggtctcatcgccgctggcgtgcaggcaggcgaccgcgtcgcactcctctcggcgacccga
tacgagtggacgctcttcgacttcgccatctgggcggccggcgccgctaccgtcccgatc
tacgactcgtcgtctcaggggcaggtcagctggatcctcggagactccgaggccgtcatc
gcaatcgtcgaaaccggcgcgcacgagcagctgttccaggacgcgccaagcactctcaaa
gccgtcatgcagatcgacgacggagcagtcgagaagctaaccgcacagggtgccgacgtc
gacgacaccgagctgaagaagcgactcgcgggcatcaaggccgacgatctggcgtcactc
gtctacacctccggcacgacaggccgtcccaagggatgcatcctcacgcaccgcaacttc
ctgtccgaggtgcgcgggattctcacggcatcgatcggcaaggtggcggttccgggaaac
cgagtcctgaccttcctgccgctcgctcacgtactggcccgcgcggtgtccctcgcgacg
ttcgaagctggtgcgtcgcaggcccactggtccgactttgccaccatcacaacccaattc
gagcgatacaagcccaacaccatcctcggtgttccgcgggtattcgaaaaagtccgtgac
ggcgcagcacgcaaggcggagtccggtggaaagattccgggcgcgatcttcgctttcgca
gaaaccactgcaaaggaatacagccaagctctcgacaaaggcggtccctcgctgatcttg
aaggcgaagcacgcagtggcagacaagctcgtgtactcgaagcttcgtgaagctctcggc
ggcgaatgctggttcgcgatctccggcggcggcgccctgactcctgagctggggcacttc
ttccgtgggctcggagttccgatctacgagggttacggtctcactgaaaccactgcggcg
cactgcgtcaacgtcccgggtgctcagaagatcggaaccgtcggacagccgatgggcggc
aacggggttcgcatcgccgaggacggcgagatcgaactcaacggcggggttgtcttcaag
ggctactggaagaacgacaaggccaccgaagagtcgtttgtcaacggctggatgcgcacc
ggggatctcggtgaactcgacagcgacggttacctttccatcacgggacgcaagaaggat
ctactggtgacggcgggcggcaagaacgtctcgcccggcccgatggaagaccgtatccgt
tcacattccatcgtctcgcaggcagtcgtcgtcggtgacgggaagacctacatcacggcg
ctgctgaccgtcgaccccgaggtgttcgagaagtggaaggccgagaacggcaagccttct
ggtgccaccgtcgccgaactacgtgacgacaaggaccttcgagcggagctgcagaaggcc
gtcgacgacgccaatgccgctgtctcacatgcggagtcgatcaagaagttcgtcattctc
gatcgcgatctgaccgaggaagacggtgagatgacagcgacgctcaagatcaagcgcaat
gtcgtcgtcgatcggttctcgaaagagatccaaggaatgtacgcgaagagctag
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