Rhodococcus qingshengii: C1M55_20255
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Entry
C1M55_20255 CDS
T05315
Name
(GenBank) nuclease
Organism
rqi
Rhodococcus qingshengii
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
RNase_H_2
AAA_11
AAA_30
AAA_19
PDDEXK_1
ResIII
NAT10_TcmA_helicase
Viral_helicase1
AAA_16
AAA_22
Cas_Cas4
SLFN-g3_helicase
UvrD_C_2
DEAD
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AUS35465
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All DBs
Position
1:4386552..4389995
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AA seq
1147 aa
AA seq
DB search
MFLLDDQIVYSASDLSAAASCEFALLRQLDARTGLIAAEAAEADPMLERTSSLGDSHERE
QLQKFIDQHGDGVVVMPRPEHSRAGLTAATLATVEAARSGAPVIYQGTFFDGRFLGFCDF
LVREGDTYAVYDSKLSRHAKVSALLQLAAYADALERNAIAASDQVHLLLGDGSTSSHDIG
DIAPVFAARRAELERVLDEHRAEGKPTQWLDDRYLRCGRCDTCSVEVESHRDLLLVAGVR
GNQREQLIVSGITTIDELAASTGPVEGIRRETLDKLRAQAAVQLRQELSGDAEFEVYEPS
ALGGLPIPDDGDIFFDFEGDPLWAEDGSTDWGLEYLFGVVEGPADDYVFKPFWAHDREGE
RQALLDFLDYVTARREAHPGMHIYHYAAYEKSALLRLAARHGVGEQTVDTLLSENVLVDL
YPIVRACLRIGQRSYSIKKLEPLYMGEHGRDGDVTNAAASVVAYADYCELRDGGQADQAR
ELLQGISDYNEYDCESTLRLRDWLAERAAEHGVELREPTGQIKIPLEELTESEIALRDFA
GHKAGSTRTPDQQAAALLAAAVGYHNRERKPYWWAHFDRLVTPIEDLVDIRDVMVVEQSE
IETDWHKSTARQKKFRRHIQLTGSFGTGTSLSPGSDLFALYATPSPDAVASENPTQRGTS
SVKVTAVVTSEGLDVVTVEELLSGDEYIDSPVALAPGRPIPTGRMEKSIAAAASDASESL
PELPHIAAVDILRRSTPRTLSGSALPPVGTDNNYADAITAALLDLDDSYVAVQGPPGTGK
TYTGARVVKTLIEQHHWRIGVVAQSHSVVENMLGGILKAGVDPALVAKKGSRSKTAEWQD
IASEEYAGFIAEAEGVGCVIGGTAWDFANTDRVPAGSLDLLVVDEAGQFALANTIAVAIS
ARNLLLLGDPQQLPQVSQGTHPEPVDESALGWLAEGHGALPPELGYFLEKTWRMHPDLCA
PVSALSYEGKLRSQETVSAARKLDGLAAGVHTVFVDHRGNSTYSPEESQEIVRQIQGLLG
TPWTDPSEFEGTRPLEQSDILVVAAYNAQVGTVERDLTEAGLTEVEVGTVDKFQGREAAV
AIVSMAASAVEDVPRGMSFLLSRNRLNVAVSRGKWCAIIVRSHALTQYMPSTPAGLVELG
AFMRLTS
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
gtgttcctactcgatgatcagatcgtctacagcgccagcgacctctcggctgcggcctcg
tgcgagttcgcactgctgcggcaactcgacgcccgaaccggtctgatcgcggccgaggcc
gccgaggcggatccgatgctcgaacggacgtcgagcctcggcgactcgcacgagcgcgaa
cagcttcagaagttcatcgatcagcacggagacggcgtcgtcgtcatgccgcgaccggaa
cactcacgcgcaggcctgaccgctgccacgttggccaccgtcgaggcagcacgatcgggc
gcgccagtcatttatcagggaacctttttcgacggccgattcctcgggttctgcgatttc
ctcgtccgcgaaggcgacacctacgcggtctacgacagcaagctctcccggcacgccaag
gtgtcggcacttctacaactcgccgcatacgcggatgcgttggagcgcaatgcaattgcc
gcctccgatcaagttcatctactgctaggcgacggcagcacgtcgtcgcacgacatcgga
gacatcgcgccggtattcgcggcacgtagagctgaactcgaacgagtcctcgacgagcac
cgcgccgaggggaaaccgacacagtggctcgacgatcggtacctgcgttgtggtcgatgc
gacacctgcagcgtcgaggtcgaaagccatcgagacctgctgctggttgcgggtgtccgc
ggcaatcagcgtgaacagctgatcgtctcggggatcacgacaattgacgaactcgccgcg
agcaccggcccagtcgagggaatccgccgggaaacactcgacaagctccgtgcacaggca
gcggttcaactacgccaggaactgtccggcgacgccgaattcgaggtctacgaaccctcg
gcgctcggcggactccccatccccgacgacggcgacatcttcttcgacttcgagggcgat
ccgctctgggccgaggacgggtccaccgattgggggttggagtatctgttcggtgtggtc
gaagggcctgcggacgactacgtgttcaagccgttctgggcacacgatcgcgagggtgag
cgccaggcgctcctcgacttcctcgattacgtcaccgcgcgtcgagaagctcatccaggc
atgcacatctaccactacgccgcgtacgagaaatcggcgctgttgcgcttggccgcacgt
cacggtgtcggcgagcagaccgtggacaccctgctcagcgagaacgtgctcgtagacctg
tacccgatcgtccgcgcgtgcctgcggatcggacaacgctcgtacagcatcaagaaactc
gagccgctctacatgggtgagcacggccgtgacggtgacgtgaccaacgccgccgcctcg
gtcgtcgcttatgccgactactgcgaattgcgcgacggcggacaagccgaccaggccagg
gaacttcttcagggcatctccgactacaacgagtacgactgcgaatccactctccgcctg
cgcgattggctcgccgagcgcgccgcagaacatggtgtcgaacttcgagagccgaccgga
cagatcaagattccactcgaagaactcaccgaatcggaaatcgcactccgcgacttcgcc
ggccacaaggccggttcgacacgcacccccgatcagcaggctgctgctctattggccgca
gcagtcggttaccacaatcgcgagcggaagccgtactggtgggcccacttcgaccgattg
gtcacaccgatcgaagacctcgtggacatccgcgacgtcatggtggtcgagcagtccgaa
atcgaaacggactggcacaagagcaccgcgcggcagaagaagtttcgtcgccacatccaa
ttgaccggaagtttcggcaccggaacgtctttgagcccgggcagtgatcttttcgcgctc
tacgcaaccccctccccggatgccgttgcaagcgagaaccccacccagcgcggcaccagc
agcgtcaaggtcaccgccgtcgtcacgtccgaagggctcgacgtggtcaccgtggaagaa
ctgctcagcggtgacgaatacatcgattccccggtcgcgttggcacctggtcgtccgatt
cccaccggacgcatggagaagtccatcgccgctgccgcgtccgacgccagcgagagcctg
cccgaactgccacacatcgcggcagtcgacattctcaggcgcagcaccccgagaaccctc
tcgggttcagcgctgccacctgtcggcaccgacaacaactacgccgacgccatcaccgcc
gcacttctcgacctcgacgattcctacgtggcggtgcaaggtcctcccggtaccggcaaa
acctacacgggcgctcgtgtcgtcaagacactgatcgaacaacaccattggcgaatcggc
gtggtggcacaatcacattcggtggtcgagaacatgctcggcggcattctgaaggccggc
gtggaccccgcactggtcgcaaagaagggcagccgcagcaagaccgcggaatggcaggac
atcgcgtccgaggaatacgccggattcatcgccgaagcggaaggcgtcggctgcgtcatc
ggcggcactgcgtgggacttcgcgaacaccgatcgtgttcccgccggcagtttggacttg
ctcgtggtcgacgaggcaggtcaattcgcgctggcgaacaccattgccgtcgcgatttcc
gcgcgaaacctgttgctgctgggcgacccgcagcagttgccgcaggtgagccaaggtact
caccccgaacctgtcgacgaatcggcactcggttggctcgccgagggacacggcgcactg
ccacccgaactcggctacttcctcgagaaaacgtggcggatgcacccggatctgtgtgcg
cccgtgtccgcattgtcgtacgagggcaagctgcgttcccaggaaaccgtcagtgcggca
aggaagctcgacggactcgctgccggagtacacacggtgttcgtcgatcaccgcggcaat
tccacctactccccggaagagtcccaggaaatcgttcgccagatccagggccttctcggc
acgccttggaccgacccgagcgagttcgagggaaccaggccgctggagcagtcggacatt
ctcgtggtcgcggcgtacaacgcccaggtgggcaccgtcgagcgcgatctcaccgaggcc
ggtctcacggaggtcgaggtcgggaccgtcgacaagttccagggccgcgaggctgcggtg
gcaatcgtgtcgatggccgcatctgccgtcgaggacgtcccgcgagggatgtcgttcctg
ctgtcgcgaaaccgtctcaatgttgctgtctcacgcggcaagtggtgcgcgatcatcgtt
cgatcgcacgcgttgacgcagtacatgcccagtacgcctgcgggattggtcgaactgggc
gcgttcatgaggctgacgagctag
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