Rhodococcus qingshengii: C1M55_20875
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Entry
C1M55_20875 CDS
T05315
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
rqi
Rhodococcus qingshengii
Brite
KEGG Orthology (KO) [BR:
rqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rqi03400
]
C1M55_20875
DNA repair and recombination proteins [BR:
rqi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C1M55_20875
Archaeal homologous recombinant proteins
C1M55_20875
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_27
AAA_29
SMC_N
CEP63
ZapB
AAA_15
AAA_21
Motif
Other DBs
NCBI-ProteinID:
AUS33299
UniProt:
A0AA34YUF5
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All DBs
Position
1:complement(4516481..4519459)
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AA seq
992 aa
AA seq
DB search
MRLHKLEVSSFGPFADTVEVDFDRLGADGLFLLHGDTGAGKTTILDAVSFALYGRVPGAR
NEGKRLLSDHAPAGSVPRVELEATISGRRIKLVRSPEYSRPKKRGTGSITENAKATLTWL
DGRGENLSRIPDIGDEINRLMGMSADQFFQVVLLPQGEFAKFLRAESDERGKLLERLFDT
KRFVSVEAWFDAKRKASATALAAREQSVRLLLAKVETAAGLEVGAEAHPLEWSRKLLAEA
QDTRDTSLAELVTAKDAAAEANRVLTVAQRTSDLVARRNRATTELAAFNTGAAQRAVIGA
ELETAKRALPVAAVAGDVDAAGLHLAAALESMTAAMSTYSATGGPEIFVPEVWPPTDDER
QRVVARIRTWRDEIVRLDAMAEDARRADAAEAEIEKLGVRRDALSERIDAIAVERTQLPE
MVRSAGQRLEDAQRAHAALPGLEAALAKASDAAAAAHEFVSLRAQAEKIRVQVLDARDAH
QSARGRWLDLVQKRIEGMAAELASSLAPGDPCQVCGSREHPAPAQSDVVTVTEPDLEVAS
AAERAAEKALSKVVDRQVTVDRDIDRVIARGGDGDVAELDRLRAAARNAVDEATHSAGQV
GGLADKLGHLNERDGELQQESASLTAELAALTERTTTLSATVEQIRAAIVAAVGEDSTIA
AQRSRFERLASAASAASEMRDDAVRAQARSAELSTKLAAAAAAAGFDSVEAAIEGVRSPA
RIAAIETELAKARDLEVAARTVLDDPEVVAVSEVETVDVDGPRERALQCAEVVNSAVAAA
SLAENRVSDLERFSGQLEKAYEAVAPERELHDELAGLADVIAGKGQNSRKMSLRAYVLAS
RLEEIAVSASVRLQRMSGGRYEFVHSDEAGSRGRRGGLGLDIRDDFTGVVRSAKTLSGGE
SFLASLSLALGLADVVAAESGGIVLDTMFIDEGFGTLDADTLDSVMAVLDELRDGGRVVG
IVSHVDEMRQRIPSRLHVIRGRAGSSVKVIAG
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
gtgaggctgcacaaactcgaagtcagctctttcgggccctttgccgacactgtcgaggtc
gacttcgaccgattgggtgcagacgggctgttccttctgcacggcgacaccggtgcaggc
aagaccacgatcctcgacgcggtttcctttgccctgtacgggcgggttccgggtgcgcgc
aacgagggcaaacggctactgtccgatcacgcgcccgccggttcggtgccgcgcgtggaa
ctcgaagcgaccatcagtggtcgcagaatcaaacttgttcgtagtccagagtattcgcgc
ccgaagaagcgtggcaccggttcgatcacagagaatgcaaaggccacactgacgtggttg
gacggccgcggcgagaatctttcgcgcatccctgacatcggtgacgagatcaaccgcctc
atgggcatgagcgctgatcagttcttccaggtggtgctcttgccgcagggtgagttcgcc
aaattcctgcgtgccgagagtgacgagcgaggcaaactgctcgagcgtctgttcgacacc
aagcgttttgtctccgtcgaggcatggttcgacgccaagcgaaaggcaagtgcgaccgcg
ctcgcggcaagggagcaatccgtgcggctgctgctcgcgaaggtcgagacagctgcggga
ctcgaggtaggcgccgaggcacacccactggaatggtcgcgcaaactcctcgccgaggct
caggacacccgcgatacaagtcttgcggagctggtgaccgcgaaagatgcagcagccgag
gctaatcgggtgctcaccgttgcgcagcgaacctcagatctggtcgctcgccgtaatcgt
gcgaccactgaactcgcagcattcaatacgggcgccgcccaaagagctgtgatcggcgct
gaactcgagaccgccaagcgcgcactgcctgtggccgctgtcgccggcgatgtggacgct
gccggcttgcacctcgctgccgcactcgaatcgatgaccgcagcgatgtcgacctactcc
gcaacgggcggtccggagattttcgtgccggaggtgtggccacccaccgacgacgagcgt
caacgcgtcgtagctcggatccggacctggcgtgacgagatcgttcgcctggacgcaatg
gcggaggatgctcgcagagccgatgcggcagaagccgagatcgagaaactcggagttcgg
cgagacgctctgtccgagcgcatcgatgccatcgcggttgaacgcactcaactgccagaa
atggtgcgctcggccggccaacgactggaggatgcgcaacgcgcgcacgcggctctgccc
ggcctcgaagctgcactggccaaagcatcggatgctgcggcagcggctcatgaattcgtc
tctctgcgtgcgcaagccgagaagattcgtgtgcaggtgttggatgcgcgcgacgcccat
cagagtgctcgcgggcgctggctcgacctcgtgcagaagcgtatcgagggcatggctgcg
gagttggcgagttcactcgcgcccggtgacccatgccaggtgtgtggttcgcgtgaacac
cctgcgccggcgcagtctgatgtcgtgacggtcaccgagcccgatctggaagtcgcgtcc
gcagccgagcgtgcggccgagaaagccctgagcaaggtagtcgaccgccaggtaaccgtc
gaccgtgacatcgaccgggtgatcgcccgcggcggggacggcgacgtcgcagaactcgac
aggctccgcgccgcggctcggaacgccgttgacgaggcgacccactctgccggtcaggtt
ggagggttggccgacaagctcgggcatctcaacgagcgtgacggcgagctgcaacaggaa
tccgcttctctgacggccgaattggcggcactgaccgagcgtacgacgactctgtcggcc
acggtcgagcagattcgagcggcgatcgtcgctgcggtgggagaagattcgaccatcgct
gctcagcgctcgcggttcgaaaggcttgcctccgctgcctcggcggcgtctgagatgcgt
gacgacgccgttcgtgcgcaggcgcgatcggcggaactgtcgaccaaactggccgctgcg
gcggccgctgctggattcgattcggtcgaggctgcgatcgaaggggtgagatcgccggcc
cgaatcgcagcgatcgaaacggaactcgccaaagcacgcgacctcgaggtggccgctcgg
acggtcctcgacgaccccgaggtcgttgcggtgagcgaagtcgagacagtcgacgtcgac
ggtcctcgcgagcgtgctcttcagtgcgccgaggtggtgaactcggctgttgcagctgct
tccctggccgagaaccgtgtgtcggatctcgaacggttcagcggacaactcgagaaagca
tacgaagcggttgcacctgagcgggaactgcacgacgaactcgctggcctcgccgacgtg
atcgccggcaaaggtcagaacagtcgcaagatgtcgctgcgagcgtatgtgctcgcgtcg
cggttggaagagatcgccgtgtcggcatcggttcggctgcagcggatgtccgggggcaga
tacgagttcgtgcacagtgacgaggcaggttctcggggtcgccgcggcggtctggggctc
gacatccgggacgacttcacgggtgtcgttcgctcggcgaagacgctctcgggcggtgaa
tcattcttggcgtcgttgtctttggccctcggacttgccgatgtggttgcggcggagtcc
ggcggaatcgttctcgacacgatgttcatcgacgaaggattcggcactctcgacgccgac
accctcgactcggtgatggctgtgttggacgagcttcgcgacggtggacgagtggtgggc
atcgtcagtcacgtggacgagatgaggcagcgaatcccgagtcgcctgcacgtcattcgc
ggacgtgcaggctcctcggtgaaggtgatcgcgggctga
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