KEGG   Rhodococcus qingshengii: C1M55_20875
Entry
C1M55_20875       CDS       T05315                                 
Name
(GenBank) SMC family ATPase
  KO
K03546  DNA repair protein SbcC/Rad50
Organism
rqi  Rhodococcus qingshengii
Brite
KEGG Orthology (KO) [BR:rqi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rqi03400]
    C1M55_20875
DNA repair and recombination proteins [BR:rqi03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     C1M55_20875
    Archaeal homologous recombinant proteins
     C1M55_20875
SSDB
Motif
Pfam: AAA_23 SbcC_Walker_B AAA_27 AAA_29 SMC_N CEP63 ZapB AAA_15 AAA_21
Other DBs
NCBI-ProteinID: AUS33299
UniProt: A0AA34YUF5
LinkDB
Position
1:complement(4516481..4519459)
AA seq 992 aa
MRLHKLEVSSFGPFADTVEVDFDRLGADGLFLLHGDTGAGKTTILDAVSFALYGRVPGAR
NEGKRLLSDHAPAGSVPRVELEATISGRRIKLVRSPEYSRPKKRGTGSITENAKATLTWL
DGRGENLSRIPDIGDEINRLMGMSADQFFQVVLLPQGEFAKFLRAESDERGKLLERLFDT
KRFVSVEAWFDAKRKASATALAAREQSVRLLLAKVETAAGLEVGAEAHPLEWSRKLLAEA
QDTRDTSLAELVTAKDAAAEANRVLTVAQRTSDLVARRNRATTELAAFNTGAAQRAVIGA
ELETAKRALPVAAVAGDVDAAGLHLAAALESMTAAMSTYSATGGPEIFVPEVWPPTDDER
QRVVARIRTWRDEIVRLDAMAEDARRADAAEAEIEKLGVRRDALSERIDAIAVERTQLPE
MVRSAGQRLEDAQRAHAALPGLEAALAKASDAAAAAHEFVSLRAQAEKIRVQVLDARDAH
QSARGRWLDLVQKRIEGMAAELASSLAPGDPCQVCGSREHPAPAQSDVVTVTEPDLEVAS
AAERAAEKALSKVVDRQVTVDRDIDRVIARGGDGDVAELDRLRAAARNAVDEATHSAGQV
GGLADKLGHLNERDGELQQESASLTAELAALTERTTTLSATVEQIRAAIVAAVGEDSTIA
AQRSRFERLASAASAASEMRDDAVRAQARSAELSTKLAAAAAAAGFDSVEAAIEGVRSPA
RIAAIETELAKARDLEVAARTVLDDPEVVAVSEVETVDVDGPRERALQCAEVVNSAVAAA
SLAENRVSDLERFSGQLEKAYEAVAPERELHDELAGLADVIAGKGQNSRKMSLRAYVLAS
RLEEIAVSASVRLQRMSGGRYEFVHSDEAGSRGRRGGLGLDIRDDFTGVVRSAKTLSGGE
SFLASLSLALGLADVVAAESGGIVLDTMFIDEGFGTLDADTLDSVMAVLDELRDGGRVVG
IVSHVDEMRQRIPSRLHVIRGRAGSSVKVIAG
NT seq 2979 nt   +upstreamnt  +downstreamnt
gtgaggctgcacaaactcgaagtcagctctttcgggccctttgccgacactgtcgaggtc
gacttcgaccgattgggtgcagacgggctgttccttctgcacggcgacaccggtgcaggc
aagaccacgatcctcgacgcggtttcctttgccctgtacgggcgggttccgggtgcgcgc
aacgagggcaaacggctactgtccgatcacgcgcccgccggttcggtgccgcgcgtggaa
ctcgaagcgaccatcagtggtcgcagaatcaaacttgttcgtagtccagagtattcgcgc
ccgaagaagcgtggcaccggttcgatcacagagaatgcaaaggccacactgacgtggttg
gacggccgcggcgagaatctttcgcgcatccctgacatcggtgacgagatcaaccgcctc
atgggcatgagcgctgatcagttcttccaggtggtgctcttgccgcagggtgagttcgcc
aaattcctgcgtgccgagagtgacgagcgaggcaaactgctcgagcgtctgttcgacacc
aagcgttttgtctccgtcgaggcatggttcgacgccaagcgaaaggcaagtgcgaccgcg
ctcgcggcaagggagcaatccgtgcggctgctgctcgcgaaggtcgagacagctgcggga
ctcgaggtaggcgccgaggcacacccactggaatggtcgcgcaaactcctcgccgaggct
caggacacccgcgatacaagtcttgcggagctggtgaccgcgaaagatgcagcagccgag
gctaatcgggtgctcaccgttgcgcagcgaacctcagatctggtcgctcgccgtaatcgt
gcgaccactgaactcgcagcattcaatacgggcgccgcccaaagagctgtgatcggcgct
gaactcgagaccgccaagcgcgcactgcctgtggccgctgtcgccggcgatgtggacgct
gccggcttgcacctcgctgccgcactcgaatcgatgaccgcagcgatgtcgacctactcc
gcaacgggcggtccggagattttcgtgccggaggtgtggccacccaccgacgacgagcgt
caacgcgtcgtagctcggatccggacctggcgtgacgagatcgttcgcctggacgcaatg
gcggaggatgctcgcagagccgatgcggcagaagccgagatcgagaaactcggagttcgg
cgagacgctctgtccgagcgcatcgatgccatcgcggttgaacgcactcaactgccagaa
atggtgcgctcggccggccaacgactggaggatgcgcaacgcgcgcacgcggctctgccc
ggcctcgaagctgcactggccaaagcatcggatgctgcggcagcggctcatgaattcgtc
tctctgcgtgcgcaagccgagaagattcgtgtgcaggtgttggatgcgcgcgacgcccat
cagagtgctcgcgggcgctggctcgacctcgtgcagaagcgtatcgagggcatggctgcg
gagttggcgagttcactcgcgcccggtgacccatgccaggtgtgtggttcgcgtgaacac
cctgcgccggcgcagtctgatgtcgtgacggtcaccgagcccgatctggaagtcgcgtcc
gcagccgagcgtgcggccgagaaagccctgagcaaggtagtcgaccgccaggtaaccgtc
gaccgtgacatcgaccgggtgatcgcccgcggcggggacggcgacgtcgcagaactcgac
aggctccgcgccgcggctcggaacgccgttgacgaggcgacccactctgccggtcaggtt
ggagggttggccgacaagctcgggcatctcaacgagcgtgacggcgagctgcaacaggaa
tccgcttctctgacggccgaattggcggcactgaccgagcgtacgacgactctgtcggcc
acggtcgagcagattcgagcggcgatcgtcgctgcggtgggagaagattcgaccatcgct
gctcagcgctcgcggttcgaaaggcttgcctccgctgcctcggcggcgtctgagatgcgt
gacgacgccgttcgtgcgcaggcgcgatcggcggaactgtcgaccaaactggccgctgcg
gcggccgctgctggattcgattcggtcgaggctgcgatcgaaggggtgagatcgccggcc
cgaatcgcagcgatcgaaacggaactcgccaaagcacgcgacctcgaggtggccgctcgg
acggtcctcgacgaccccgaggtcgttgcggtgagcgaagtcgagacagtcgacgtcgac
ggtcctcgcgagcgtgctcttcagtgcgccgaggtggtgaactcggctgttgcagctgct
tccctggccgagaaccgtgtgtcggatctcgaacggttcagcggacaactcgagaaagca
tacgaagcggttgcacctgagcgggaactgcacgacgaactcgctggcctcgccgacgtg
atcgccggcaaaggtcagaacagtcgcaagatgtcgctgcgagcgtatgtgctcgcgtcg
cggttggaagagatcgccgtgtcggcatcggttcggctgcagcggatgtccgggggcaga
tacgagttcgtgcacagtgacgaggcaggttctcggggtcgccgcggcggtctggggctc
gacatccgggacgacttcacgggtgtcgttcgctcggcgaagacgctctcgggcggtgaa
tcattcttggcgtcgttgtctttggccctcggacttgccgatgtggttgcggcggagtcc
ggcggaatcgttctcgacacgatgttcatcgacgaaggattcggcactctcgacgccgac
accctcgactcggtgatggctgtgttggacgagcttcgcgacggtggacgagtggtgggc
atcgtcagtcacgtggacgagatgaggcagcgaatcccgagtcgcctgcacgtcattcgc
ggacgtgcaggctcctcggtgaaggtgatcgcgggctga

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