Rhodococcus qingshengii: C1M55_22325
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Entry
C1M55_22325 CDS
T05315
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rqi
Rhodococcus qingshengii
Pathway
rqi03420
Nucleotide excision repair
rqi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rqi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C1M55_22325 (pcrA)
03430 Mismatch repair
C1M55_22325 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rqi03400
]
C1M55_22325 (pcrA)
Enzymes [BR:
rqi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C1M55_22325 (pcrA)
DNA repair and recombination proteins [BR:
rqi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C1M55_22325 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
C1M55_22325 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
DEAD
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
AUS33560
UniProt:
A0A1C3Z8Z5
LinkDB
All DBs
Position
1:complement(4796188..4798680)
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AA seq
830 aa
AA seq
DB search
MNTYPALGEHDGHSQHDGGGARGHDAGSDALLEGLNPQQREAVVHAGSPLLIVAGAGSGK
TAVLTRRIAYLLAERGVTPGQILAITFTNKAAAEMRERVAALVGPRANAMWVSTFHSSCV
RILRAQAALLPGLNSNFSIYDSDDSRRLLTMISKDLELDTKRFSARLLATHISNLKNELV
GPEEAVVAADQDPAELPRLIAKVYGHYQQRLRAANALDFDDLIGETVALLQAFPQIAEYY
RRRFRHVLVDEYQDTNHAQYMLVRELVGGAGESDHAVAPAELCVVGDADQSIYAFRGATI
RNIEEFERDYPDARTILLEQNYRSTQNILSAANSVISKNTGRREKRLWTDSGEGELIVGY
VADNEHDEASFVASEIDRLVDQGETKFADIAVFYRTNNSSRALEEIFIRLGVPYKVVGGV
RFYERKEVRDIVAYLRVLANEDDTVSLRRILNTPRRGIGDRAEACVAVHSEHRNISFAAA
LRDGAEGKVALLNTRSQKAIASFLEMMDGLRALLPTAAADEDEPFELGDIGEVAEAVLER
TGYRAELAASSDPQDGARLDNLNELVSVAREFSSDARNAAGLIDPDDEETAAMREGEPDP
GSLAAFLERVSLVADADQLPDSDDGVVTMMTLHTAKGLEFPVVFVTGWEDGQFPHMRALG
DPAELSEERRLAYVGITRARQRLYLTRAIMRSAWGQPIQNPASRFIQEIPEDLINWRRED
PGTGGGFGSGRPGYGSGSRYGSQGGQGYGGGQNYGGGSGKAASTPSFGAARGRNNVLVLA
TGDRVSHDKYGLGTVLETKGTGPTATVTIDFGSAGKVRLMLIGGVPMVKL
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgaacacgtacccagcactcggtgagcacgacggacattcccagcacgacgggggcggc
gcgcggggacacgacgcgggttcggacgccctcctcgagggtctcaacccgcaacagcgc
gaggccgtggtccatgccggttcgccgttgctgatagtcgcgggcgccggctcgggcaag
actgcagtgctgacgcgtcgtatcgcctatctgctggccgaacggggtgtcacccccggt
cagatcctggccatcacgttcaccaacaaggctgcggccgagatgcgtgagcgtgtggca
gctcttgtcggaccgcgtgccaacgccatgtgggtctcgacgttccactccagttgcgtg
cggattctgcgagcacaggcggcgctcctacccggtttgaactcgaatttctcgatctac
gattccgacgattcgcgtcgactgctgacgatgatctcgaaggacctcgagctcgacacc
aaacgattctccgcgcggcttctcgctacgcatatctccaatctgaagaacgaactcgtc
ggaccggaagaggcggttgtcgcagccgatcaggatccggccgaacttccgcgactgatc
gccaaggtctacggccactaccaacagcggctgcgtgcggcgaacgcactcgacttcgac
gatctcatcggtgagaccgtcgcgcttcttcaggcgtttccacagatcgccgagtactac
cgccgccgcttccgtcacgtgctcgtcgacgagtaccaggacaccaaccacgcgcaatac
atgcttgtgcgtgaactggtcggcggtgccggcgagtccgaccacgccgttgccccggcc
gaactgtgcgtcgtcggtgacgccgatcagtcgatctacgcattccgcggagccactatc
cgcaacatcgaagagttcgaacgcgactacccggatgctcggaccatccttctcgaacag
aactaccgttcgacgcagaacattctgtctgcggccaactccgtgatttccaagaacacc
ggccgacgagaaaagcgtctgtggaccgattcgggtgaaggcgaactgatcgtcggctac
gttgcagacaacgagcacgacgaagcatcgtttgtcgcctcggagatcgatcggctggtg
gaccagggcgagaccaagttcgccgacatcgcggtgttctaccggaccaacaactcctcg
cgcgcgctcgaggagatcttcattcgactcggagtgccgtacaaggtggtcggcggcgtt
cgcttctacgagcgcaaggaagttcgggacatcgtcgcgtatctgcgcgtcctcgccaac
gaggacgacaccgtgagcctgcgacgcattctcaacacgccccgacgcggtatcggtgat
cgagccgaagcctgcgtcgccgtgcactccgagcatcgcaacatcagcttcgccgccgct
ctccgtgacggcgcggaaggcaaagtggcgctgctcaatacgcggtcacagaaggccatc
gcgtcgttcctcgagatgatggacgggctgcgggccctgctaccgacagcggccgccgac
gaggacgaaccgttcgagctcggtgacatcggtgaggttgccgaggcggtgctcgagcgc
accggctaccgcgccgagcttgcggcgagcagcgatccgcaggatggcgcgcgactcgac
aacttgaacgaactcgtcagcgtggcaagggaattcagttccgacgcgcgaaacgcggcc
gggctgatcgatccggacgacgaggaaaccgcagcaatgcgtgaaggtgaacccgatccg
ggttcgcttgccgccttcctcgaacgggtatcgcttgtcgccgacgccgatcaactgccg
gactccgacgacggcgtcgtgaccatgatgacgcttcacaccgccaagggcctcgagttc
ccggtcgtcttcgtcaccggttgggaggacgggcagttcccgcacatgcgcgccctcggc
gatccggcggagctgtccgaagagcgtcgacttgcttacgtcggcatcacccgtgccagg
cagcgcctgtacctgacgcgcgcgatcatgcgttcggcgtgggggcaaccgatccagaac
ccggcgtcgcggttcatccaggagatcccggaggacctgatcaactggcgccgtgaggat
ccgggcaccggtggcggattcggaagcggcaggccgggttacggcagcggaagccgctac
ggcagccagggcggccagggatacggcggcgggcagaactacgggggagggtccggcaag
gccgcgtcgactcccagtttcggtgccgcgcgtggccgcaacaacgttctggtcctcgcc
acgggtgaccgcgtcagtcacgacaagtacggtctgggcaccgtgttggaaaccaagggc
actggccccaccgcgacggtcaccatcgacttcggtagcgcgggcaaggtgcggttgatg
ctcatcggcggtgtgccgatggtcaagctgtag
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