Rhodococcus qingshengii: C1M55_23035
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Entry
C1M55_23035 CDS
T05315
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
rqi
Rhodococcus qingshengii
Brite
KEGG Orthology (KO) [BR:
rqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rqi03400
]
C1M55_23035
Enzymes [BR:
rqi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
C1M55_23035
DNA repair and recombination proteins [BR:
rqi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
C1M55_23035
Prokaryotic type
C1M55_23035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AUS33687
LinkDB
All DBs
Position
1:complement(4942570..4943916)
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AA seq
448 aa
AA seq
DB search
MSNSVIWFRRDLRVGDLPTLTAAADAGGQTLGLFVLDEKLLGPAGSPRQNQLFANLSALD
NQLDGRLMVVRGDPADVVPRVAESVGAEEVHISADYGPYGRRRDAAVAEKVELIATGSPY
AVAPGRVTKADGDPYKVFTPYFRQWMEHGWRGPASTDAGTVRWFDPSEKDGGPRRVSIPA
PSGTVSDVVGEAGALEQWKEYCENDLDRYDDERNRPDLDTTSRMSIPLKYGTIHPRTMLA
DLSKRLGDGAQAYRRQLAWRDFYADILFQRPDSARKNYDDKFDRLRHDGGVDADAAFTAW
CEGKTGFPIVDAGMRQLAAENWMHNRVRMIVASFLVKDLHIPWWRGARYFMSQLVDGDLA
SNQHGWQWTAGSGTDASPFFRVFNPITQGEKFDPDGTYVRRWVPELRDVPGKAVHSLKAM
RPVDYPDPIVDHAHEREEALRRYGEIKG
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaactctgtgatctggtttcgacgcgatctgagggtcggtgatcttccgactctg
actgcagcggcggatgccggcggacagacgttgggtttgttcgtcctcgacgagaagttg
ctcggaccggcaggctcaccccgccagaatcaactgttcgccaacttgtcggcactcgac
aaccagctcgacggacgattgatggttgttcgaggtgatccggcagacgtggtgccccgc
gtggcggaatccgttggcgccgaagaagttcacatcagtgccgactacgggccctacggc
cgacggcgcgacgcggccgtggccgagaaggtggagttgatcgccaccgggtcaccatat
gccgtggcgcccggacgcgtcaccaaggcggacggtgatccgtacaaggtgttcacgccg
tacttccgtcagtggatggaacatggttggcggggccccgcgtcgaccgatgcggggacg
gtccgttggttcgatccgagcgagaaggacggtggcccgcgccgggtgagtatccccgcg
ccgtccggcaccgtcagcgatgtcgtcggtgaggccggtgcgctcgaacagtggaaagaa
tactgcgagaacgatcttgaccggtacgacgacgaacgaaatcgacccgacctcgacacc
acgagtcggatgtcgatcccgctcaagtacggcacgattcatccgagaaccatgttggca
gatctctccaagcgactcggagacggcgctcaggcgtaccgtcgccagcttgcttggcga
gacttctacgcagacatcctgtttcagcgccccgacagcgcgcggaagaactacgacgac
aagttcgaccgtttacgtcacgacgggggagtcgacgcagacgccgccttcacggcctgg
tgtgaaggcaagaccggcttcccgatcgtggatgccggcatgcggcaactcgccgccgag
aactggatgcacaatcgggtccgaatgatcgtcgcgtcattcctggtgaaggacctgcac
attccgtggtggcgcggcgcacggtacttcatgtcgcaactggtggacggtgacttggcc
tccaatcagcacgggtggcagtggactgccgggtcgggtacggatgcttcgcctttcttc
cgcgtcttcaacccgatcacgcaaggggagaagttcgatcccgacggcacatacgtccgt
cggtgggtccccgaacttcgcgatgttcccgggaaggccgtccactcgttgaaggcgatg
cgcccagtcgactacccggacccgatagtcgatcacgcgcacgagcgtgaggaggccttg
cgccggtacggcgagatcaaaggctga
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