KEGG   Rhodococcus qingshengii: C1M55_23120
Entry
C1M55_23120       CDS       T05315                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
rqi  Rhodococcus qingshengii
Pathway
rqi00010  Glycolysis / Gluconeogenesis
rqi00020  Citrate cycle (TCA cycle)
rqi00260  Glycine, serine and threonine metabolism
rqi00280  Valine, leucine and isoleucine degradation
rqi00310  Lysine degradation
rqi00380  Tryptophan metabolism
rqi00620  Pyruvate metabolism
rqi00630  Glyoxylate and dicarboxylate metabolism
rqi00640  Propanoate metabolism
rqi00670  One carbon pool by folate
rqi00785  Lipoic acid metabolism
rqi01100  Metabolic pathways
rqi01110  Biosynthesis of secondary metabolites
rqi01120  Microbial metabolism in diverse environments
rqi01200  Carbon metabolism
rqi01210  2-Oxocarboxylic acid metabolism
rqi01240  Biosynthesis of cofactors
Module
rqi_M00009  Citrate cycle (TCA cycle, Krebs cycle)
rqi_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rqi_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
rqi_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:rqi00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    C1M55_23120 (lpdA)
   00020 Citrate cycle (TCA cycle)
    C1M55_23120 (lpdA)
   00620 Pyruvate metabolism
    C1M55_23120 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    C1M55_23120 (lpdA)
   00640 Propanoate metabolism
    C1M55_23120 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    C1M55_23120 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    C1M55_23120 (lpdA)
   00310 Lysine degradation
    C1M55_23120 (lpdA)
   00380 Tryptophan metabolism
    C1M55_23120 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    C1M55_23120 (lpdA)
   00670 One carbon pool by folate
    C1M55_23120 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rqi04147]
    C1M55_23120 (lpdA)
Enzymes [BR:rqi01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     C1M55_23120 (lpdA)
Exosome [BR:rqi04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   C1M55_23120 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 DAO NAD_binding_8 HI0933_like GIDA FAD_oxidored FAD_binding_2 FAD_binding_3 AlaDh_PNT_C Lycopene_cycl Lys_Orn_oxgnase 3HCDH_N Trp_halogenase 2-Hacid_dh_C Thi4 Amino_oxidase XdhC_C
Other DBs
NCBI-ProteinID: AUS33702
LinkDB
Position
1:complement(4961489..4962886)
AA seq 465 aa
MVENNTSHKYDVLVIGGGPGGYVAAIRAAQLGLSVALVERDRLGGICLNWGCIPTKAMLH
GADVAHTLSELDTYGFSSASVQFDISKLVSFSRGVSEKLSGGVAYLMKKNGVDVISGTAK
LVDKGVVSVEGQTYRADHVIIATGARPRSIPGVAPDGDRVWTYFDALVPKELPKSLLVIG
SGAIGVEFASLYRDLGTEVTIVEMAPHIMPVEDEEISAFVRKQFEKRGITIHTGASVSAV
TVGDDAVQVNVQTSDGVESLTVDRVLVAAGITGNVEDLGLEALGVEIERGAIVTDQWCRT
SAFGIYAIGDVAGAPCLAHKASHEAVLCVEKLAGVPDVHPLDRDYVPGCTYARPQVASLG
LTEKQCAGTGRALRVGHFDLQANGKALAIGEAEGFVKTIFDADTGELLGAHMVGPDVTEQ
IQGFGIARSLEATGEDLAEVVFAHPTLSEAMHESVLSALGRPLNA
NT seq 1398 nt   +upstreamnt  +downstreamnt
gtggtggaaaacaatacgtcgcataagtacgacgttcttgtcatcggtggcggccccggt
ggttacgtggcggcgatccgggctgcccagttggggttgagcgtcgcgctggtagaacgt
gatcgcctcggaggtatctgcctcaactggggttgtatccccaccaaggcgatgctgcac
ggcgcggacgtcgcgcataccttgagtgaacttgacacatacggattcagttcggcgtct
gtccagttcgacatctcgaagttggtgtcgttcagccgaggggtttcggagaaattgtcc
ggcggtgttgcctacctgatgaagaagaacggcgtcgacgtcatctcaggcaccgcgaag
ttggtggacaagggcgtcgtgtccgtggaaggtcagacgtatcgagccgaccacgtgatc
attgcaaccggcgcccggccgcgttcgattcccggggttgcccccgacggtgatcgggtg
tggacctacttcgacgcgctcgtcccgaaggaactgccgaagtcgctgctcgtgatcggg
tccggcgcgatcggagtcgaattcgccagcctgtaccgcgatctcggaaccgaggtgacc
atcgtcgagatggcaccacacatcatgccggtcgaggacgaagagatctcggccttcgtt
cgcaagcagttcgagaagcgtggcatcacgattcacaccggagcctcggtgtcggcggtg
accgtcggcgacgacgccgtccaggtgaatgtgcagacgagcgacggtgtcgagtcgttg
accgtggaccgggtgttggtggcggccggaatcaccggcaacgtcgaggatctggggttg
gaggctctgggcgtcgagatcgagcgcggtgcgatcgtcaccgaccagtggtgccgtacc
agcgctttcgggatctatgcgatcggtgacgtcgcgggcgctccatgtctggcgcacaag
gcaagccacgaagctgtcctgtgcgtcgaaaagttggcaggcgtgcccgacgttcatccg
ctcgatcgcgactacgttccgggatgcacgtatgcccgcccacaggtggcgagcctgggt
ctgacggagaagcagtgcgccggtactggtcgcgcgctgcgggtcggacacttcgacctg
caggcgaacggcaaggcactggcgatcggcgaggccgaaggcttcgtcaagacgatcttc
gacgccgataccggggaacttctcggcgcgcacatggtcggtccggatgtgaccgagcag
attcagggtttcgggatcgctcgatccctcgaagccaccggcgaggatctcgccgaggtc
gtgtttgctcatccgacgctctcggaggcaatgcacgagtctgtgctctcggcgctgggg
agacccctcaacgcgtga

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