Rhodococcus qingshengii: C1M55_27885
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Entry
C1M55_27885 CDS
T05315
Symbol
sdhA
Name
(GenBank) FAD-binding protein
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
rqi
Rhodococcus qingshengii
Pathway
rqi00020
Citrate cycle (TCA cycle)
rqi00190
Oxidative phosphorylation
rqi00650
Butanoate metabolism
rqi00720
Other carbon fixation pathways
rqi01100
Metabolic pathways
rqi01110
Biosynthesis of secondary metabolites
rqi01120
Microbial metabolism in diverse environments
rqi01200
Carbon metabolism
Module
rqi_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rqi_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rqi_M00149
Succinate dehydrogenase, prokaryotes
rqi_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
rqi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
C1M55_27885 (sdhA)
00650 Butanoate metabolism
C1M55_27885 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
C1M55_27885 (sdhA)
00720 Other carbon fixation pathways
C1M55_27885 (sdhA)
Enzymes [BR:
rqi01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
C1M55_27885 (sdhA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
HI0933_like
NAD_binding_8
GIDA
Pyr_redox
Pyr_redox_2
Motif
Other DBs
NCBI-ProteinID:
AUS34555
UniProt:
A0A1C4DNZ1
LinkDB
All DBs
Position
1:5910823..5912775
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AA seq
650 aa
AA seq
DB search
MNSFELDDLRSIGTPVDGKVPAGDPATAWPTRKLDYKLVSPLNRRKFTVIVVGTGLAGAA
CAASLGELGYHVESFTFHDAPRRAHSVAAQGGINAARARKVDNDSLARFVKDTVKGGDFR
GREADCFRLAEESVRVIDHMNAIGAPFAREYGGTLATRSFGGVQVSRTYYTRGQTGQQLQ
IASSQALQRQIAAGTVNLHTRTEMLDLIVSDGRAQGIVTRDLVTGEIGATTGHAVVLASG
GYGTVFHKSTLAKNSNATAAWRAHRRGALMASPSFIQFHPTALPVNSEWQSKTILMSESL
RNDGRIWVPAKPGDDREPGDIPENERDYYLERKYPAFGNLSPRDVSSRAAREQIDSGHGV
GPLKNSVYLDFRDALARLGRKTIEERYGNLFSMYRDATSEDPYTVPMRIAPGAHFTMGGL
WNDYDQMTSIPGLFVGGEAGWGYHGANRLGANSLLSACVDGWFTLPYAIPNYLAPLLGST
PLELSDPAVTSTLTDVRGRVDLLLSVGGTHGPDRFHRQLGEILYAGCGVTRTAEGLTKAI
AEIRALRTDFWSNLRVAGSGNQFNQELERAGRVADFLELAELMCVDALDRDESCGAHFRA
EHQTPDGEAQRNDQDWCFVSAWETAQDGRHVRHDEPLSFTAVPLQTRNYV
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
gtgaacagcttcgaactcgacgatctgcgcagcatcgggacaccggtggacggtaaggtc
ccggccggcgatccggcgacggcctggcccactcgcaaactcgactacaagctcgtcagc
ccactcaaccggcgcaagttcacggtcatcgtcgtcggtaccggcctcgccggcgcggcc
tgcgccgcctccctcggtgaactgggctaccacgtcgagtccttcaccttccacgatgca
ccccgccgtgcacacagtgtcgccgcgcaaggaggcatcaacgctgctcgcgctcgaaaa
gtggacaacgacagtctcgcccgcttcgtgaaggacaccgtcaagggcggtgatttccgg
ggccgtgaggccgactgtttccgtctcgccgaagaatccgtacgcgtcatcgatcacatg
aatgccatcggggcaccgtttgctcgcgagtacggcggcactctggccacccgatccttc
ggcggcgttcaggtgtcgcgcacgtactacacgcgcgggcagacaggccagcagttgcag
atagcgtcgtcgcaggcactgcaacgtcagatcgcagccggaacggtcaacctacacacc
cgaaccgagatgctcgatctcatcgtttcggacgggcgagcacaagggatagtcacacgc
gatctcgtgaccggtgagatcggcgccaccacaggccatgccgtcgtactggcatccggc
ggctacggaaccgtattccacaagtccacacttgcgaagaattccaacgccacggccgcg
tggcgagcgcaccgacgcggtgcgttgatggcttcaccctcgttcatccaattccatccg
acggcgcttcccgtcaactccgagtggcagtcgaaaaccattctgatgagcgaatccctg
cgcaacgacggccggatctgggtaccggccaagcccggagacgatcgtgagcccggcgac
attcccgaaaacgaacgcgactactacctcgagcgcaaatatcctgcgttcgggaacctc
tctccccgcgacgtctcttcacgggccgcccgcgagcaaatcgactccggtcacggcgtc
ggccctctgaaaaacagtgtgtacctggatttccgcgatgcgttggcacggctcggccgc
aagaccatcgaggagcgatacggaaatctgttctcgatgtatcgcgacgccaccagcgaa
gacccctatacggtgccgatgcgcatcgcccccggagcccacttcaccatgggaggactg
tggaacgactacgaccagatgacctccatccccggcttgttcgtcggtggtgaggcaggc
tggggataccacggggccaaccgcctcggcgccaattcgttgctctcggcatgcgtcgac
ggctggttcaccctcccgtacgcgattccgaattatcttgcaccgctactcggatccact
ccactcgaactgtccgatcccgctgtgacgtcgacgctcactgacgtgaggggtcgggtg
gacctgctgctctcggtcggcggaacacacggccccgacaggttccatcgacaactgggc
gagatcctctatgcgggttgcggtgtcacccgaacggccgagggcttgaccaaggcgatc
gccgaaatccgcgcactgcgaaccgatttctggtcgaacctgcgagttgccggcagcgga
aaccagttcaaccaggagttggaaagggccggcagggtagccgatttcctcgagctcgcc
gaactgatgtgcgtcgatgctctcgatcgtgacgagtcctgtggagcgcactttcgtgcc
gaacatcagactcccgacggcgaagcgcagcgaaacgatcaggactggtgcttcgtctcc
gcgtgggaaaccgcccaggacggcagacacgttcgacacgacgagccgttgtccttcacc
gctgttccactgcagacgaggaactacgtatga
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