Rickettsia rickettsii Arizona: RPO_01930
Help
Entry
RPO_01930 CDS
T01721
Name
(GenBank) ribonuclease E
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
rra
Rickettsia rickettsii Arizona
Pathway
rra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RPO_01930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rra03019
]
RPO_01930
03009 Ribosome biogenesis [BR:
rra03009
]
RPO_01930
Enzymes [BR:
rra01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
RPO_01930
Messenger RNA biogenesis [BR:
rra03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
RPO_01930
Ribosome biogenesis [BR:
rra03009
]
Prokaryotic type
rRNA processing factors
RPO_01930
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
AFB24638
LinkDB
All DBs
Position
346561..348633
Genome browser
AA seq
690 aa
AA seq
DB search
MNKKIIIDANFPSETRVVLLGQSNNIEDIEFQTTVRQQNKGNIYLAKVTRIEPSLQAVFI
EYGMDKSGFLPFSEIHPNYYNLPTSERNFPVNAFPEIALSNITVEDDKEKPAAIYDALVD
SEEIDLKTIEDLVESKFQSELNLEAADDIEMIQSGTPESNIPQYKQYKVQEVIRKNQILL
VQVTKEERGSKCAAFTTYISLAGKYCVLMPNKGSQNGISRKISNGEERKRLKDILNKIVS
GDKNAYSVIVRTAGRGSSTLDLKKDYNYLARLWNKIRKSTIKFPAPCFIHEEDGIIRKTI
RDMCDHNVKEVVIQGQEGYEDASKFMQDLLPSELVKLKEHKSKTPIFTKFQVEEQLVKLY
QPVVTLPSGGYIVINPTEALIAIDVNSGKSTSEQNIEETALKTNLEAAQEVAKQVKLRDL
SGLIVVDFIDMSEAKNRKIIERSFKEFLSRDRARIQTGNISQFGLLEFSRQRLRSSFLET
NSAICSHCNGKGVIRASDANAMLILRTIENEIFEERIDVINVFTNIVSVIYLLNNKRAEI
KFIEEKYNIKLNFYSDPHATSDSYSIEKVKLFKKNNNNFNSVKPVIQNHNSDYTEEELKK
EQLRKNKHKWKTANNSNNVANEVKDKSLEAEESVEQTVSVVEEVKVVESNAGLEEAQAAP
KKTKRRYRNKTSNKKCPSNTVEDTEKNAES
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaagattataattgatgctaattttccaagcgaaacaagagtagttttatta
ggacaaagcaacaatatagaagatattgaatttcaaacaaccgtaagacaacaaaataaa
ggtaacatttatttagcaaaagttacaagaatagaaccgtcgctacaagctgtttttata
gagtacggaatggataaaagcggttttttaccgtttagtgaaatccatcctaactattac
aatttgcctacctcggagagaaattttccggttaatgcttttcctgaaatagctctttca
aatattacggttgaggatgataaagagaaaccagctgctatatatgatgctttggttgat
agtgaagaaattgacctaaaaaccatagaagatttagtagagagtaaattccagtcagaa
cttaatttagaagcggctgatgatattgaaatgattcaaagcggtacccctgagtcaaat
attccgcaatataaacaatataaagttcaagaagtaataagaaaaaaccaaatattatta
gtgcaggttactaaggaagaacgaggaagtaagtgcgccgcttttactacttatatatcc
ttggctggtaaatattgtgttttaatgcctaataaaggttcgcaaaacggtatatcgcgt
aaaatatcaaacggggaagaaagaaaaagactgaaagatattttaaataaaatagtaagc
ggtgacaaaaatgcttatagcgtcattgttagaaccgcaggtagaggaagtagcacctta
gatttaaagaaagactataattatttagcaaggttatggaataaaattcgtaaaagtact
attaaatttccggctccgtgttttattcatgaggaagatggtataatacgtaaaaccata
cgtgatatgtgcgatcacaatgttaaagaggtggtaattcaaggacaagagggttatgaa
gacgcttcaaaatttatgcaggatttattaccttcagagcttgtaaagctgaaagagcat
aaaagtaaaactcctatatttactaagtttcaagtagaagagcaattagttaaattatat
cagcctgtagtgacgttaccttcaggaggatatatcgttattaatcctacggaagctctt
attgcaattgatgtaaattccggtaaatcaacttctgaacaaaatattgaagaaacggca
ctaaaaactaatttagaagcagcccaagaagtagcaaagcaagtaaagcttagagatcta
tcaggtttgatagttgttgattttatagacatgagcgaagctaagaatcgtaaaattatt
gaacgatcctttaaagagtttttaagtcgtgatcgtgctcgtatacaaaccggtaatatt
agtcagtttggactacttgaattctcaaggcagagattacgttcttctttcttagaaact
aattcggcaatttgttctcattgtaacggtaaaggagtcattagagcaagtgacgctaat
gctatgttaattttacgtactatagagaatgaaatttttgaagaaagaattgatgtaata
aatgtttttaccaatatcgtttcagttatttatctacttaataataaacgtgctgagata
aaatttattgaagaaaaatataatataaaacttaatttttattccgatcctcatgctaca
tcagatagttattcgattgaaaaagtgaagttgttcaagaaaaataacaataattttaat
tctgttaagccggtaattcagaatcataattccgattatactgaagaagagctgaaaaaa
gaacagttacgcaaaaataaacataaatggaaaacagctaataatagtaataatgttgct
aatgaagtaaaagataagagtttagaggcagaagaatcggtggagcaaaccgtaagcgtt
gtggaagaggtgaaagttgtagaaagtaatgccggcttagaagaagcacaagctgctcca
aaaaagacaaaacgtagatatcgtaataaaacatcaaataagaaatgtccttctaatacc
gtcgaagatacggaaaagaatgcagagtcttga
DBGET
integrated database retrieval system
