Rickettsia rickettsii Arizona: RPO_02530
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Entry
RPO_02530 CDS
T01721
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rra
Rickettsia rickettsii Arizona
Brite
KEGG Orthology (KO) [BR:
rra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rra03032
]
RPO_02530
03400 DNA repair and recombination proteins [BR:
rra03400
]
RPO_02530
Enzymes [BR:
rra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
RPO_02530
DNA replication proteins [BR:
rra03032
]
Prokaryotic type
DNA Topoisomerases
RPO_02530
DNA repair and recombination proteins [BR:
rra03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RPO_02530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Toprim_C_rpt
Zn_ribbon_Top1
WHD_POLR3C
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AFB24746
LinkDB
All DBs
Position
complement(445785..448115)
Genome browser
AA seq
776 aa
AA seq
DB search
MKLVIVESPAKAKTINKYLGDEFKVIASFGHIRDLPSKKGSVLPDENFAMKYDISDKAGK
YVDAIVKDATKADAVYLATDPDREGESISWHVAEVIKEKNQVKSDDFFKRVAFNEITKKA
IIHAVENPRKLDTNLVNAQQARRALDYLVGFTLSPLLWRKLPGCKSAGRVQSVALRLICE
REDEIERFKSEEYWDISLKMQNSNNELFTAKLTQVNDQKLEKFSIINEKNAKDLTKKLKS
QKFHVDKIEKKQQKRQPQPPFITSSLQQEAARKLGFSAKKTMQIAQKLYEGVDIGKETIG
LITYMRTDGVTLSNDAIADIRKLIDKSYGDKYLPTSPRIYKSKVKNAQEAHEAIRPTNIT
YTPDSLKEKLDKDYYKLYELIWKRTIACQMENVIMDLVVANLASENKEYLAKANGSTIAF
DGFYKVYRESMDDEAEEENKMLPPLKEQEPLKTKAVIPNQHFTEPPPRYSEASLVKKLEE
LGIGRPSTYASILSVLQDRKYVALEKKRFIPEELGRLVTVFLVGFFKKYVEYDFTAGLEN
ELDAIAAGKLEWKAALNNFWSGFNHNIESVNEQKITEIISYVQKALDYHLFGENKESKIC
PSCHTGKLSLKLGKFGAFLACSNYPECTFRKSIVSGNDNNENEGEPAAMPNENKVLGTDK
DGVEIYLKKGPYGPYIQLGKQEGKVKPKRSPVPASLNQNDITLDIALKLLSLPLKIGIHK
DSDEEIIIGYGKFGPYIKYMGKFISVQKKYDFLNLSLDDAMKLIEENKAKLEKKQA
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgaaattagtaatagtagaatcgccggcaaaggcaaaaacgataaataaatatttaggt
gatgagtttaaggtcattgcatcattcggtcatattagagatttaccttctaaaaaaggc
tcggtattacctgatgaaaattttgcaatgaaatatgatatttccgataaagccggtaaa
tatgtagatgccatagttaaagatgctacaaaagctgatgcagtatatcttgcaaccgat
cctgatcgtgagggtgaatctatctcatggcatgttgcagaggtaataaaagaaaaaaat
caagttaaatccgatgattttttcaaaagggtagcatttaacgaaatcactaaaaaagca
attattcatgccgttgaaaaccctaggaaacttgatactaacttagtaaatgcccaacaa
gcaagaagagctttagactatttagtcggctttaccctttcacctcttttatggcgtaag
ttaccgggatgtaaatcggcaggacgtgtgcagtctgtggctctgcgattaatatgtgag
cgagaagatgaaatagagcgttttaagtcagaagaatattgggatattagccttaaaatg
caaaatagtaataacgaactatttactgctaaattgactcaagtaaacgatcagaagtta
gaaaaattctcaattattaacgaaaaaaacgccaaagatttaaccaaaaaattaaaatct
caaaaatttcatgttgataagatagaaaaaaaacaacaaaaacgtcaaccacaacctcct
tttattacttcatcactacaacaagaagcagcaagaaaattaggttttagtgctaaaaag
actatgcaaatagcacaaaaactttatgagggtgttgatataggtaaggaaactataggg
cttattacttatatgagaaccgacggcgttacattatcaaatgatgcaatagcagatata
cgtaagttaatcgataaaagttacggcgataaatatttaccgactagccctagaatttat
aaatcaaaagtaaaaaatgctcaagaagctcatgaagcaataagacccacaaatattact
tatactcctgatagcttaaaagaaaagctagacaaggattattataagctttatgagttg
atttggaaaagaactatagcctgccaaatggaaaatgttataatggatttggtagttgca
aatttagcttcggaaaataaagaatatttagcaaaagcaaacggatcgactatagccttt
gacggattttataaggtttatcgtgaaagtatggacgatgaagctgaagaagaaaataaa
atgctgccgcctttaaaagaacaagagccgctgaaaactaaagcagttattccaaatcaa
cattttaccgaaccgcctccaagatattcagaagcaagtttagtgaaaaaacttgaagag
cttggcatcggtcgtccttcgacctatgctagtattttatcggttttacaagatcgaaaa
tatgttgctcttgagaaaaaacgatttatacctgaagagcttggacgtttggtaacggta
tttttagtcggtttcttcaaaaaatacgttgaatatgattttactgcaggacttgaaaac
gaattagacgcaatagcagccggcaaacttgaatggaaagccgctttaaacaatttttgg
agcggttttaaccataatattgaatcagtaaacgagcagaaaataaccgagattattagc
tatgtacaaaaagcccttgattatcacctgttcggtgagaataaagaatctaaaatttgt
ccttcatgtcacacgggcaagcttagcttaaagcttggtaagttcggagcgtttttagca
tgtagtaattaccctgaatgtacttttagaaaatctattgttagcggtaacgataacaac
gagaatgaaggcgagcctgccgctatgcctaatgagaataaagttttaggtacggataaa
gacggagtagaaatatatctgaaaaaaggaccttacggaccttatattcaacttggcaaa
caagaaggcaaagtaaagccgaaacgtagcccagtgcctgctagcttgaaccaaaatgat
attacacttgatatagcattaaagcttctaagcttaccgctaaaaataggtattcataaa
gatagcgacgaggaaattattataggatacggtaaattcggtccttacataaaatatatg
ggtaaatttatttcggtacaaaaaaaatatgattttctaaatttaagcttagatgatgcg
atgaagctaattgaagagaataaagcgaaattagagaagaaacaggcgtaa
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