Rickettsia rickettsii Arizona: RPO_07230
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Entry
RPO_07230 CDS
T01721
Name
(GenBank) uracil DNA glycosylase superfamily protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rra
Rickettsia rickettsii Arizona
Pathway
rra03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RPO_07230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rra03400
]
RPO_07230
Enzymes [BR:
rra01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
RPO_07230
DNA repair and recombination proteins [BR:
rra03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RPO_07230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Nop
Motif
Other DBs
NCBI-ProteinID:
AFB25559
LinkDB
All DBs
Position
complement(1213442..1214227)
Genome browser
AA seq
261 aa
AA seq
DB search
MNNTLKWLSAIGVEYYCHEHPPQLKVRNNTELTEKPQVKLMSTKETVFNMNDKVHDNITL
ARSLADKANNIEELKESLLHFNGCELKKFATNTVFGDGNLEAKIMLIGEAPGSTEDLKGI
PFYGESGNLLDNMLHAIGISRKNNAYITNTVFWRPPANRQPTFEEVDICRPFVEKHIALI
NPQLIILVGSTAATSLLGKNSGITKIRQEYYFYTNKYLSAPIQTTAIFHPAYLLRQPMQK
RTSWYDLLKIKEYLVNNRLLA
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgaataatacgcttaaatggttaagtgcaatcggtgttgaatattattgccatgaacat
ccaccgcaattaaaggtacgtaataatactgaactaactgaaaagccacaagtaaaactt
atgtctacaaaagaaactgtattcaatatgaatgataaagttcatgataatataacccta
gcaagatctcttgccgataaagctaataatatcgaagaactaaaagaatctctactacat
tttaatggttgtgaacttaagaaatttgctactaatacggttttcggtgacggtaatttg
gaagctaaaattatgttaataggcgaagccccgggaagtaccgaagatttgaaaggaata
cctttttacggcgaaagtggcaatttacttgataatatgctacatgctatcggaatttca
cgaaaaaataacgcttatattactaatacggtattttggcgtcctcctgctaatagacag
ccgacgttcgaagaagtcgatatttgtagaccttttgtcgagaagcatattgctcttatt
aacccgcagctaattattctagtcggtagcacggctgcaactagcttacttggaaaaaat
tcgggtattactaaaattagacaagaatattatttttataccaataaatatctatccgct
cctattcaaactacggcaatcttccaccctgcctatttactccgccaacctatgcaaaaa
cgcacctcttggtatgatttactcaagattaaggagtatttagtcaataatagacttctt
gcataa
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