Rickettsia rickettsii Brazil: RPN_01310
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Entry
RPN_01310 CDS
T01737
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
rrb
Rickettsia rickettsii Brazil
Pathway
rrb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rrb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RPN_01310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rrb03400
]
RPN_01310
Enzymes [BR:
rrb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
RPN_01310
DNA repair and recombination proteins [BR:
rrb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
RPN_01310
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
AFB21813
LinkDB
All DBs
Position
complement(216510..217292)
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AA seq
260 aa
AA seq
DB search
MKIATWNINSIKTRLNLLRNFLSKENPDILLLQEIKCETAKFPFDALSDLPYNSYVHGQK
SYNGVAIISKFPVDEIIKDFPNNYCSDQARFLEIKLSLPIGFCNIISLYAPNGSFVGSDK
FVAKLAFYDNFINYLSTKKSFDEKTIIGGDFNIAPFDIDVYSPKLLAETTCFTEVEQKKL
RTILNSGFEDLYRLMHPSKQEFSWWDYRARCFEQNKGMRIDMILGCNNTIDYLENCYMDY
NLRTQEKPSDHIPVIASFKG
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatagctacttggaatattaattccataaaaacaagacttaatttattgcgtaat
tttttatctaaagaaaatccggatattttattattgcaagaaataaaatgcgaaaccgca
aaatttccttttgatgcattatccgatctaccttataattcttatgttcacggacaaaaa
tcatataacggcgttgctataatttcaaaatttcctgtcgatgaaataattaaggatttt
ccgaataattactgtagtgatcaagcaagattcttagaaataaaattatcattacctata
gggttttgtaatataatctcgctctatgctcctaacggttcatttgtcggtagcgataaa
tttgtagcaaaactagcattttatgataattttatcaattatctatcaactaaaaaatct
tttgacgaaaaaactatcataggcggtgatttcaatattgcaccgttcgatatagacgta
tattcacctaagctactagctgaaactacgtgttttactgaggttgaacaaaaaaaatta
cgcactattctaaattccggatttgaggatttatacagattaatgcatccgagtaaacaa
gaattttcatggtgggattatagagccagatgttttgaacaaaataaaggtatgaggatt
gatatgattcttggttgtaataatactattgactatttagaaaattgctatatggattat
aatttaaggactcaagaaaaaccttcagatcatataccggtaattgcgagttttaaggga
tag
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