Rickettsia rickettsii Brazil: RPN_03885
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Entry
RPN_03885 CDS
T01737
Name
(GenBank) penicillin-binding protein dacF
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
rrb
Rickettsia rickettsii Brazil
Pathway
rrb00550
Peptidoglycan biosynthesis
rrb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rrb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RPN_03885
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rrb01002
]
RPN_03885
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rrb01011
]
RPN_03885
Enzymes [BR:
rrb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
RPN_03885
Peptidases and inhibitors [BR:
rrb01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
RPN_03885
Peptidoglycan biosynthesis and degradation proteins [BR:
rrb01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
RPN_03885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
Beta-lactamase2
Beta-lactamase
CytoC_RC
Motif
Other DBs
NCBI-ProteinID:
AFB22277
LinkDB
All DBs
Position
complement(636710..637630)
Genome browser
AA seq
306 aa
AA seq
DB search
MFRKFLLPYIFVVTFFFAPISEAKKAVRNTPKPPVQTSLVIDAKSGKVLQAHNSQIRIYP
ASLTKLMTLYLMFEAIEAGKLPLDKKLLVSAKAAKMPPCKLGLKAGETITVREAINGLII
KSANDAAVTVAEGMKGSEKAFAHLMNIKAKQLGMKNTYFKNASGWHDPLQQTTARDIAKL
AMALKRDYPKFYPLFAKTSFVFRGNVVNGHNRVTKNYQGAEGMKTGFHTPAGYNLVTTAS
RNGKSLIAVVTGGKSAESRDQKMMGLLDQHFNIKPIVSKPAIKLASNNKSTTKAKSKIIK
KKNIRS
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgtttaggaaatttttattaccttatatttttgtcgtaacatttttctttgcgcctata
agcgaagcaaaaaaagccgtaagaaatacccctaagcctcctgttcaaactagtttagta
attgatgcaaaaagcggtaaagtattgcaggcccataattcacaaattcggatttacccc
gcttctttaactaagctaatgactctatacttaatgtttgaagcaattgaagccggtaag
ttacctttagataaaaaattacttgtatcagcaaaagctgcaaaaatgccaccgtgtaag
ctgggtttaaaagcaggggaaactataaccgttcgagaggcaattaatggattaattata
aaatctgctaatgatgctgctgtaacggttgctgagggcatgaaaggttcagagaaagct
tttgctcatttaatgaatattaaagctaaacagctcggtatgaagaatacctattttaaa
aatgcttcaggttggcatgacccattgcagcaaactaccgcaagagatatagctaaactt
gctatggctttgaagagagattatcctaaattttatccgttatttgctaaaaccagcttt
gtatttcgtggaaatgtagtaaacggacataatagggttactaaaaattatcaaggtgca
gaagggatgaaaacaggttttcatacaccggcaggttataatttagtaactactgcttct
aggaacggtaaatcattgattgccgttgttacaggcggtaaaagtgccgaatctcgtgat
caaaagatgatggggctattagatcagcattttaatattaagcctatagtctctaaacct
gcaatcaagcttgcctctaataataaatctactacaaaagctaaatcaaaaataataaag
aaaaagaatatacgtagttga
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