Rickettsia rickettsii Brazil: RPN_06760
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Entry
RPN_06760 CDS
T01737
Name
(GenBank) cell surface antigen
Organism
rrb
Rickettsia rickettsii Brazil
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autotransporter
Motif
Other DBs
NCBI-ProteinID:
AFB22807
LinkDB
All DBs
Position
complement(1143149..1148662)
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AA seq
1837 aa
AA seq
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MNKLTEQHLLKKSRFLKYSLLASIAVGAAIPFEGMAMSKEAFRIDLSNKLLNHVSQLKGH
KDTTNTPQQIGTVIVPEPEINTYTPSEIREMKISNKPKASNPLKDVPIEDHYKVVARSKS
DVGKARKVRPITRRKTFAGIEKTKQSQNTYTPESTEQMPQKPEIIITASSPTVSPASNSF
ITAPNTPNTTLISPEHYTTAPGTPSSTPVTPYQPTSDSKPNDSLGANTPPNTNSKAARRL
SFSSSDPQQQAVQSSSQVKSEVPPKPTFVPLPIKKGSTEIVAGMVSNISRVNEMIGIKLA
EVTQAIKDTTGKKDKERLQKLYRQLTSTQKTTEVLKSRAEEIETKIKIGKNKDKIKKLEK
ELTSKNNKADRLFQKIEKIDIPANKVSIKSQETVPVTTASTEVSAFQAQQARINEARQSI
FNKNKSSGDNARKSNAGTKREKKKQEAQKQLSEIKKQEKAVKTASDKAKEVAASAKEETS
RTALRAMQDKMNGDSEQLNKIEENLKLLTPVVYNSSTGPTYKQSPKAKPTIPLSHGVQRI
LGEQPEDEEGYLVPIKVQQQPYTVMLPNQEIEDPIPSHSKDIYEAKVSQYINYLNRIQPN
QSNQAQIDSVIDSLATEMRKFSADQFSQKLDEIAHLAGIKAYEGLFEKLYEIQQARIPET
QKVYEQAEISQSYAEYEENSRKSSTPVLSPSSSAKSVISSNFEEKSALLQTTTTDESLRS
DNNWKNSAPYSSSPTLNKRGLEYLDLAGDAFVQNLKQSDTLTIETLDLITPTQNTTVAKS
DSSRKNNVSGSIPEIQQLQSEKMRTETLGVQDDLGLDLHYAPQETLTEESTYLVSSKKKQ
GNIIKRAVSKVESILHTNYSENRKRKRDGETSKQRTVDQEGEFGHAWGNENHKESSLSVV
SGFTKKATQLISLLDAKRTAILQTTSPSQRKSLSLVLQEIENDYREAIKISQELQQVLIR
KPEDIKAYNAKAEKKLDAIKSRADKHFDNIETDVDIGFNPNGGNSHSMPTANMDSLPKNL
AVTPPINVGSLYNSPQAQQFREDHKNIIINDRSQGRLNLVDSTITKGTQPLSNLSTIYES
VSDENLASETIYKTEQPKPSISYTNTSKRKLPIPLFRSAELDKKLEYLDLEDKLLEVEEA
RIVKEKQAIAKLNQYQDPENLEFKRLAMEALDLSLKESQLKAKRKAIGAEFSLNEKSSST
DVSIRSYSIDDISSVLSGAESNLSRSPSVSGLEDLNNMQLGELKSKKELELDTLNKEKIW
LDLDTESKPKVTESKPVFSCSSSVGSINSFSNDDLSSRDVVAPVDTLNIEINKDYVDTYI
RVLSNKIQKIEELSGSSSRSEELNHIKEAMAYISNRIQDVEELDEKMLLVINSQLQEHDE
KISSLLREEATDILAQLLLQEMLVSDGKSESTLPAGDEEQEDTEVSRQLSSLPALASSNE
SALALSDDREKECLALGDGSEDEESYDSGFEEEEETIGQLSDSDGGNLKITEVDKVIPLE
QEAKKEMQMQISENAPTLNQAKVVNTIVNNMIRNRLDVNMSNNMAVGAGDEEESHIKRGL
WMRGMYGTNNHGRVENMTGYRGTNKGATIGFDAEIDNNIVGIAYSNVHSVFKFKNSKNND
KELINSHVVSIYGQKELPKNFALQALVSASKNFIKDKTTYSYGDTKIKSNVKHRNHSYNA
EALLHYNYLLQGKLVITPNIGLRYGKSRDGVYNETGVNVQEIALTMKENNILSGIVGTKV
TVPLKDALKFNNLGLTFQGAVEHNFKEKTQRINRVVKIFDNTFKHNYLIPKQPKTSYNLG
TGIIGSIKNTTISLDYNYYLNKHYRSHQGSVKLKVNL
NT seq
5514 nt
NT seq
+upstream
nt +downstream
nt
atgaataagttaacagaacaacatttactaaaaaaatcaagatttttaaaatattctctg
cttgcctctattgcagtaggagctgcaataccttttgagggtatggcgatgagtaaagaa
gcatttcgtatcgatctcagtaataaattgttgaatcacgtgtcacaattaaaaggacac
aaagatacgacaaataccccgcagcagataggaacagtaattgtaccggaaccagaaata
aacacatatactccatctgaaataagagaaatgaaaatatctaacaaacctaaggcatct
aatccattaaaagatgttcctatagaggatcattataaagtggtagcacgtagtaagtct
gatgtcgggaaagcaagaaaagtacgaccaattactagacgcaaaacatttgcaggcatt
gaaaaaacaaaacaaagtcaaaatacttatactcctgaatcgacagaacaaatgcctcaa
aaaccagagattataataacagcgtcttcgcctactgttagcccagcttcaaatagtttt
atcactgcacctaatacaccaaatactaccctgatatcacctgaacattatactacggca
cctggtactccatcatcaacaccggtgactccgtatcagcctacttcagattctaaacca
aatgatagtttaggagctaatacaccaccaaacacaaactcaaaggcagcacgaagatta
tcgtttagcagtagcgacccgcaacaacaggcagtgcaatctagctcacaggttaaatca
gaagttcctccgaagccaacatttgtaccgttgcctataaaaaaaggcagtactgaaatt
gtagcaggaatggtaagtaatatatcacgcgttaatgagatgataggaatcaagttagct
gaagtaacacaggctattaaagataccacaggtaaaaaagataaagaacgattgcagaag
ttgtataggcagctaacttcaacacaaaaaacaacagaagtactcaagtcaagagctgaa
gagatagaaacaaaaatcaaaataggtaaaaataaagataaaataaagaaacttgaaaaa
gagttaacaagtaaaaacaataaagcagatagattatttcagaaaatagaaaaaatagat
attccagcaaataaagtttcgataaaatcgcaggaaacagttccggttacaacggcgtca
actgaagttagtgcgtttcaagcacagcaagcaagaattaatgaggctcggcaaagtata
tttaataaaaataaatcaagcggagataatgcaagaaaaagtaatgctggaacaaaaaga
gaaaagaaaaaacaagaagcacaaaagcagttatcagaaataaagaaacaagaaaaagct
gtaaaaacggcatcagataaagctaaagaagtagctgctagtgcaaaagaagaaacaagt
agaactgcattacgagccatgcaagataaaatgaatggtgattctgaacaattaaataag
atagaggaaaatctaaagttattaactcctgttgtttataatagttctaccggtcctact
tataagcagtcgccaaaagcaaagccaactataccattaagtcatggggttcagagaatt
ttaggtgaacaaccagaggatgaagaggggtacttagtgccaataaaagttcagcagcaa
ccttatacagtaatgttgccgaatcaagaaatagaggaccctattccaagtcattcaaaa
gatatttatgaggctaaggtttcacaatacattaattatttgaatagaatacagccaaat
cagtcaaatcaagctcaaatagatagtgtaatagatagtttagcaacagaaatgagaaag
tttagtgcggatcaatttagtcaaaaattagatgagattgcacatcttgccggtataaag
gcatatgaaggtttgttcgagaaattatatgaaattcagcaagctagaattccagaaact
caaaaagtatatgagcaagcggaaatatctcagtcttatgcagagtatgaagagaattca
agaaaaagcagtactccagtattatcaccctcgtcttcagctaaaagtgtaatatcatca
aattttgaagaaaaatcagcattgttacaaaccacaactacagatgaaagcttgagatct
gacaacaattggaaaaattctgcaccatattcttcaagtccaacgcttaataaaagagga
ttagaatatttagatttagctggcgacgcgttcgttcagaatctaaaacaatctgatacg
ttaactatagaaactcttgatttaataacgccaacacaaaatacaactgttgctaaaagt
gactcatcgaggaaaaataatgtaagtggaagtattccggagatacaacaactgcaatca
gaaaaaatgcgtacagaaactttaggtgtgcaggatgatctagggctagatttacattat
gcacctcaagaaactttaactgaagaaagtacctatttagtttctagtaagaaaaaacaa
ggtaatataataaagagagctgtatcaaaagtagagtcaattttgcacacaaattattca
gagaacagaaaaaggaaaagagatggagaaacctcaaagcaaagaacagtagatcaagag
ggagaatttggccacgcttggggaaatgagaatcataaggagtctagtttaagtgtagtt
agtggattcacaaaaaaggcaactcagcttataagccttttagatgcaaagagaaccgca
atactgcaaacaaccagtccttcacaacgaaaatcacttagtttagttttacaggaaata
gaaaatgattaccgagaagcaattaaaatctctcaagaattacagcaggtattaatacgc
aaaccggaagatataaaagcttataatgcaaaagcagaaaaaaaattggatgctattaaa
agcagagcagataaacactttgataatatagaaacagatgtagatattggatttaatcca
aatgggggaaatagtcattctatgccgactgctaatatggatagcttaccaaaaaattta
gctgtaaccccacctataaatgtagggtcactatataactctccgcaagctcaacaattt
cgagaagatcataaaaatattataataaatgatagatcacaaggtagactaaatttggtt
gatagtactattacaaaaggtacacagccattatctaatttatctactatatatgagtcg
gttagtgatgagaatttagcatcagaaacaatatataagacagagcaacctaagccatct
ataagttacacgaatactagtaaacgaaaattacctataccattattcagaagtgccgag
cttgataagaaattagagtatttagatttagaagataaactattagaagtagaggaagct
agaatagttaaggaaaagcaagctattgccaaattgaatcaatatcaagatccagaaaac
ctagaatttaagcggttagctatggaagcactagacttatctttaaaagaatcacaatta
aaagcaaaaaggaaagccataggagcagaattttctttaaatgaaaagtcttcaagcaca
gatgtatcaatacgttcctattcaattgatgacataagcagtgtacttagtggtgcagaa
tcaaatctatcccgttcaccttcggttagtggcttagaggatttaaacaatatgcaatta
ggggaattaaaatctaaaaaggaattggagttagatactttaaataaagaaaagatttgg
ttagatctagatactgaatctaaacctaaggtaactgagagtaagccggtattttcatgt
tcatcttcagttggtagcataaacagcttctctaatgatgatttgagtagtcgtgatgtt
gtagctccggtagatactctaaatatagaaattaataaagattatgtagatacctatata
agagtattaagcaataaaatacaaaaaatagaagaattgtctggctcaagttctagaagt
gaggaacttaatcatattaaagaagcaatggcttatataagtaatcgtatacaggatgta
gaggaattagatgaaaaaatgcttttagtaataaattcacaattacaagaacatgatgaa
aaaatttcttcgttacttcgcgaagaagctacagatattcttgctcagttattgctacaa
gaaatgttagtgtcggatggtaaatcagaatctaccttacctgcaggagatgaagaacaa
gaagacacagaagtaagtagacaattatcttcattacctgcacttgcatcaagtaatgag
agtgcattagcattaagtgacgatagagaaaaggaatgtttagcattaggcgatggtagc
gaagatgaagaaagttatgattcaggatttgaagaggaagaagaaacaataggacaatta
tccgattccgatgggggtaatcttaaaataacggaagttgataaggttattcctcttgaa
caggaagcaaaaaaagaaatgcaaatgcaaatttcagaaaacgctcctactttaaatcaa
gcgaaagttgttaatactattgtaaataatatgattcgtaacagattagatgtgaatatg
tctaataatatggcagtgggagccggtgatgaagaagagtctcatataaaaagaggtttg
tggatgcgtggtatgtacggcactaataatcatggacgcgttgagaatatgaccggttat
agaggtactaacaaaggtgctactatcgggttcgatgctgaaatcgacaataatatcgta
ggtatagcttatagtaatgttcattcagtatttaaatttaaaaatagtaaaaataatgat
aaagaacttattaatagtcatgtggtttctatttacggacaaaaagaattaccgaagaat
tttgcactacaagctttagtatctgcttctaaaaactttattaaagataaaacaacttat
tcatatggtgatactaaaattaaaagtaatgtaaaacatcgtaatcatagttataatgcg
gaagcattactgcattataattatcttttgcagggcaagctcgttattaccccgaatatc
ggcttaagatacgggaagtcacgagatggggtatataatgaaaccggtgttaacgtacaa
gaaatagctcttacaatgaaagagaataatatattgtccggaattgtcggtactaaagtc
acagtacctttaaaagatgctctaaaatttaataatttaggtctaacattccaaggagcg
gtagaacataattttaaagagaaaacccaaagaataaatagagttgttaaaatatttgat
aatacattcaaacataattatctaataccgaagcaaccgaaaacatcctataatttagga
acgggtattataggcagtatcaaaaatactactatttcgttggattataattattatcta
aataaacattatagaagtcatcaaggtagtgttaagcttaaggtaaacctataa
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integrated database retrieval system
