Rickettsia rickettsii Colombia: RPL_01525
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Entry
RPL_01525 CDS
T01722
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
rrc
Rickettsia rickettsii Colombia
Brite
KEGG Orthology (KO) [BR:
rrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rrc03032
]
RPL_01525
03400 DNA repair and recombination proteins [BR:
rrc03400
]
RPL_01525
Enzymes [BR:
rrc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
RPL_01525
DNA replication proteins [BR:
rrc03032
]
Prokaryotic type
DNA Topoisomerases
RPL_01525
DNA repair and recombination proteins [BR:
rrc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RPL_01525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AFB23208
LinkDB
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Position
278457..281174
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AA seq
905 aa
AA seq
DB search
MTDKSSSNLVPVNIEDEMKVSYLDYAMSVIVSRAIPDVRDGLKPVHRRIIYSMHEAGNHA
NKPYRKSARIVGDVMGKYHPHGDSAIYDALVRMAQDFSLRLPLVDGQGNFGSMDGDAAAA
MRYTESRMAKVAYKLVEDIDKETVSFNPNYDGSEEEPSVLPAMFPNLLVNGSGGIAVGMA
TNIPPHNLGEVIDACCLYIDNNDIEILDLLEVVKGPDFPTGSMILGISGIRSAYLTGRGS
IIIRGRAEIENIGNSRQAIIITEIPYMVNKARLVEKIAQMVKEKRIEGISDLRDESNKNG
VRIFIELKKDVVAEVVLNQIYACTQLQTSFGVIMLALKDGLPKVMNLKEVIAAFVSFREV
VVTNRTIYLLNKARDRAHILLGLTIAVSNIDEIIRIIKASNDPNAAKQELMARQWEALNI
LPLVKLVDDKAMLNEQGKCNFTEVQAKAILEMRLQRLTAMEKNKLEEDLKNLTTEITEYL
NILGSRTRLLEILKEELIKVKEEFATPRLTSIEFGEFDQDIEDLIQREEMVVTVTLGGYI
KRVPLSSYRAQKRGGKGRSGLSMRDEDITTQVFVGSTHTPMLFFSNIGQVYSLKLYKLPL
SNPQGKGRPMVNILPLKANEHITNIMPLPENQDERDNLNIMFATAKGNIRRSDLLDFKKL
QSNGKIAIRLDEDDKLIDVKPCKEDEHILLATKAGKALRFPVESLRVIKSRTSDGVRGMK
LAKEDSVISMTVLKGISSTKEDRDAYLSVPWEQRLEIAKGEEFNPEELGVSLTAPAIVEM
ANSEEFILTVTENGFGKRSSAYGYRITDRGGSGIINMDINDKTGLVVGVMPVKMDDELML
ITNSGKLIRCKLESIRITGRNTSGVILFKLDDGEKVVSVSLIAETVEREEDSELEEEGLE
QSEDV
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
gtgactgataaatcttcttctaatttagtaccggtaaatatcgaagatgagatgaaagta
tcttatcttgattatgctatgagcgttatagtaagtagagctataccggatgttcgggac
ggcttaaagccggtacatcgccgaattatctattccatgcatgaagccggtaatcatgct
aataaaccttatagaaaatccgctagaatagtcggtgacgtgatgggtaaataccatccg
cacggcgatagtgctatttacgatgcgttagtacgtatggcacaagatttttccttgcgt
ttaccgcttgtagacgggcagggtaatttcggttcgatggatggtgatgcggcggcagca
atgagatataccgaatctcgaatggctaaagttgcgtataagctcgtagaggatatcgat
aaagagactgtcagctttaaccctaattacgatggttctgaagaagagccttccgtactt
cctgcaatgtttcccaatttattggtgaacggtagcggaggcattgcggtcggtatggca
actaatatcccgcctcataatcttggtgaggttatcgatgcgtgctgtttatatatagat
aataacgatatagaaatattagatttacttgaagttgttaaaggaccggattttcctaca
ggttcaatgattttaggcattagcggtattagatcggcatatcttactggtagaggtagt
atcattatacgaggtcgagccgagattgagaatatcggtaatagccgtcaagcaattatt
attaccgaaataccgtatatggtaaataaggcaaggcttgttgagaaaatcgctcaaatg
gttaaggaaaagcgtatagaaggtataagtgatttacgtgatgaatcgaataaaaacggt
gtaaggatttttattgagttaaagaaagacgtagttgctgaagtagtcttaaatcaaata
tacgcatgtactcagctacaaactagctttggtgttattatgcttgctcttaaagacggg
ttaccgaaagtgatgaatttgaaagaagtaattgcagctttcgttagttttagggaagta
gtagttactaaccgtactatatatttactcaataaagcaagagatagagctcatatttta
ctaggactaactattgccgttagtaatatcgatgaaataatacgtattattaaagcttca
aatgacccgaatgcagctaaacaagaattaatggctcgtcagtgggaagcattaaatatc
ctacctcttgtaaagttggttgatgataaagcaatgttaaacgagcagggtaaatgtaac
tttaccgaagtgcaagctaaggcaatcttagaaatgagattgcaacgcctgaccgctatg
gagaaaaacaagcttgaagaggatttaaagaacctcactacggaaatcaccgaatatctt
aatatacttggctctcgtacaaggttacttgaaattttaaaggaagagctcattaaagtt
aaagaagaatttgcgactcctcgtcttacttcaattgaatttggcgaatttgatcaagat
atagaagatttaattcagcgtgaagaaatggttgtaaccgtaacgcttggcgggtatatc
aagcgtgtacctctaagtagctatcgtgcgcaaaaacgtggcggtaaaggaagatcaggg
ctttcaatgcgtgatgaagatattaccacgcaagtttttgtcggtagtacccatactcct
atgttgttcttctcaaatatcggtcaggtttatagtttaaaactgtataaactgccttta
agtaatccgcagggtaagggtagaccgatggttaatatattaccgctgaaagcaaatgag
catattacgaatattatgccgctacctgaaaatcaggatgagagggataatttaaacatt
atgttcgcaactgccaaaggtaatatcagaagaagcgatttattagatttcaaaaagctt
cagtcgaacggtaaaattgctattaggcttgatgaggacgataaattaatagatgtaaaa
ccatgtaaagaagatgagcatattttacttgctaccaaagccggtaaagctttaagattc
cctgttgaatcgctgcgtgttattaaaagccgtacttctgatggggtacgaggtatgaag
cttgccaaagaggattccgtaatttctatgactgtgcttaaaggtattagtagtacaaaa
gaggatagagatgcttatttatcagtgccgtgggagcagagattagagattgctaaaggt
gaggagtttaatcctgaagaacttggcgtaagcttaactgccccggctattgtagaaatg
gcaaattccgaagaattcattttaaccgtaactgagaacggttttggtaagagaagttca
gcttatggctatagaattactgaccgtggcggtagcggtataatcaatatggatattaac
gacaaaactggtttagtcgtcggtgttatgccggttaaaatggatgatgagttaatgctg
attaccaatagcggtaagttaattcgctgtaaacttgagtcaatacgtattacgggacgt
aatactagcggcgtaatcctatttaagctagatgatggtgaaaaagtcgtgtctgtctct
ttaattgctgaaactgttgaaagagaagaagatagtgagttagaggaagagggattagag
caatctgaagatgtgtaa
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