Rickettsia rickettsii Colombia: RPL_01950
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Entry
RPL_01950 CDS
T01722
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
rrc
Rickettsia rickettsii Colombia
Pathway
rrc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rrc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RPL_01950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rrc03400
]
RPL_01950
Enzymes [BR:
rrc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
RPL_01950
DNA repair and recombination proteins [BR:
rrc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
RPL_01950
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
AFB23288
LinkDB
All DBs
Position
352271..353086
Genome browser
AA seq
271 aa
AA seq
DB search
MQIVTWNINSLRLRIDLLRKLAYEHQPDIILLQETKVADSLFPLEVIKNIGYEHVIYSGQ
KSYNGVAIISKFPLNNVFSLELYNSDKRHIAAMVNDIEIHNFYVPAGGDIPDIEVNTKFK
HKLEYIRLMQEWLTTNRTKNDKMIIVGDLNIAPHEHDVWSSKQLRNVISHTDIERSLLVE
LQNALGFIDSSRHFVSLDEKFYTWWSYRNIDWKKSNRGRRLDHIWVSDNLKGALFSMHLL
SEARDWFSPSDHVPYFVTFNLQMSSRGQATG
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgcagatagttacttggaatattaattcattgcgtctacggatcgatttattaagaaaa
ttagcatatgaacatcagccggatattattttacttcaagaaacaaaggtagctgactca
ttatttcctcttgaagttattaaaaatataggctatgaacatgtaatatattcagggcag
aaatcatataacggtgttgctattatttcaaaatttcctttgaataatgttttttcattg
gagttatataatagtgataaaaggcatatagcagctatggttaatgatatagaaatacat
aatttttatgttcctgccggcggtgatatacctgatatcgaggtaaatacaaaatttaag
cataagcttgaatatataaggttaatgcaggaatggttaacgactaaccgtactaaaaac
gataaaatgattattgttggggacttgaacattgctccgcatgaacatgatgtatggtct
agtaagcagttgcgaaatgttatcagccataccgatattgaacgctcgttattggtagag
ctacaaaatgcgttaggttttattgatagtagcagacatttcgtatcgcttgacgaaaaa
ttttatacttggtggagttatagaaatatagattggaaaaaatctaacagaggtagaaga
cttgatcatatttgggttagcgataatttaaaaggtgcattattttctatgcatttacta
tcagaagcacgtgattggttttcaccttcggatcatgtaccatattttgtgacttttaat
ttacagatgtcatcccgtggtcaagccacgggataa
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