Rickettsia rickettsii Colombia: RPL_03085
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Entry
RPL_03085 CDS
T01722
Name
(GenBank) ATP-dependent nuclease subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
rrc
Rickettsia rickettsii Colombia
Brite
KEGG Orthology (KO) [BR:
rrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rrc03400
]
RPL_03085
Enzymes [BR:
rrc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RPL_03085
DNA repair and recombination proteins [BR:
rrc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
RPL_03085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AFB23501
LinkDB
All DBs
Position
complement(545065..547581)
Genome browser
AA seq
838 aa
AA seq
DB search
MTADYSFLKSFAKYIIDKLGKDTKVQIILPNNFSCLELKKILTDKYKIKLPIIIPFNSLI
SKKNDSDYISKIEELLILSSIITEYKELPLNNNESLKAAELLRKLFNDLIINNIDIKLIE
VYNNSNYWQKIYKFLEYCFLRWQEEISFTQKQTKAVYKLKLLQEEIIKIKTGHKQVILAG
IFKPNVFLKRFEEELKDYIIHYNPASKQISDGISYYEPNDIYEETKQISYICSRNKDRRI
AIVTNNNKLKRVYCNFLDKYEDLLGNDLRLTNIGELLTSIIKILCNNFDLKLLFLLLKNP
LINCPTVQQLELMLSNKNRFISSPKYLLQLQFDNEDIREYCRNLIDILFTDTPHNIQAIL
TLTKEITEKLLPTIWEKEGGAELLEFLTNLTTYSKYINSTDKKDFPKIFSFLLSNIKYYK
NTDAASIIIGRPEDLALCEFDLIILPHFNNENWTLSAKAHPWLSKKALQILNIDYDEIAP
TLYSDYFNLFLQNKQIVILNAKKYDGKLSVPSNLFLKLEKGSVSPRDLITGSSNYMDTVV
KPRYDKSIEIHSPSFPTTLSVTEIETLIRNPYGFYAKKILGLRKKDHIWEEPKISDFGNL
IHKVLEEYSKNYNKQYINLNLLDKQNALINIGNHILYSTILPSYTKKTWQIKLTAFSKAF
ILFDIERRKNCKEIYFETKGELRLNIVGQDIKIIGIADRIEISKSNNITILDYKTGTIPT
KKEIELGLSPQLIIESLMLLENGFTQCNSLSLLCHPQPLLCYSRESRNPVINNNITIAYV
KITSTEPYVHTTEIALSIETLNRHKAGLVKLLEHYITNKFFSYDLNLSKYNDYLHLSR
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgattattcttttttgaaaagttttgctaagtatatcattgataaattaggt
aaagatacaaaagttcaaataatattgcctaataatttctcatgcctagaattaaagaag
attttaaccgataaatataaaattaaattacctatcattattccttttaattctcttatt
tcaaaaaaaaacgattcggattatatatctaaaatagaagaattacttattttatcatcc
attatcaccgaatataaagaattacctttgaataacaatgaatcattaaaagctgcagaa
cttttaagaaaattgtttaatgatcttataatcaataacatcgatataaaattaattgaa
gtctataacaattctaactattggcaaaagatttataaatttctagaatattgcttttta
agatggcaagaagaaatatcgtttactcaaaaacaaactaaagcagtttataaattaaag
ctattacaagaagaaataataaaaataaaaacaggacataagcaggtaatactcgccgga
atattcaaacctaatgtttttttaaaaagatttgaagaagaattaaaggattacataatt
cactataatcctgcctccaagcagattagcgatggtatatcttattatgaacctaatgac
atttatgaagaaactaaacaaatatcttatatatgtagccgtaataaagacagacggatt
gcaatcgttacaaataataataagcttaaaagagtatattgtaattttttagacaaatat
gaagatctactaggtaatgacttaaggcttactaatataggtgaattactaacttccatt
attaaaatattatgtaataattttgatttaaaacttctatttttattacttaaaaatcct
ttaattaactgccctactgtgcagcagttagagttaatgctatctaataaaaaccgtttt
atatcctcaccgaaatatttattgcaattacaatttgataatgaggatataagagagtat
tgccgtaacttaatagatattttatttaccgatactccacataatatacaagctattcta
accttaactaaagaaataactgaaaaacttttgcctactatttgggaaaaagaaggagga
gcagaactacttgagtttttaaccaatttaactacatatagtaaatatataaattcaacg
gataaaaaggattttcctaaaattttttcttttttactttctaatatcaaatattacaaa
aatactgacgctgctagtattattataggacggcctgaagatttagcattatgtgaattt
gacttaattatattaccgcattttaataatgaaaactggacacttagtgctaaagctcac
ccatggcttagcaagaaagcattgcagatactaaatatagattacgatgaaattgctcct
actctatattcagattacttcaatttatttctacaaaataagcaaatagttatactgaat
gctaaaaaatatgatgggaaactgtcagtgccgagtaatttatttttgaagctagaaaaa
ggttctgtgtcaccccgtgacttgatcacggggtccagtaattatatggataccgtggtc
aagccacggtatgacaagagtattgagatccacagcccctctttcccaaccaccttatca
gtaaccgaaatagaaacattaataagaaacccatacggtttttatgctaagaaaattctt
ggactacgtaaaaaagatcatatatgggaagaacctaaaatatcagatttcggtaatttg
attcataaagttttagaggaatattctaaaaattacaacaaacaatatattaatttaaat
ttgcttgataaacaaaatgctttaataaatatcggtaatcatattttatatagcactatt
ttaccaagctacaccaaaaaaacttggcaaataaaactcacggctttcagcaaagctttt
attttatttgatatagaacgccgaaaaaactgcaaagaaatctattttgaaactaaaggg
gagttacggctaaatattgtaggtcaagatataaaaataatcggtatagctgaccgaatt
gaaataagtaaatcaaacaatataactatactagattataagaccggtactattccgact
aagaaagaaatagagcttggactctctccgcaacttatcatagaaagtttgatgttacta
gaaaacggatttacgcaatgtaattctctgtcccttttatgtcatccccagccccttttg
tgttattcccgcgaaagcaggaatccagttataaataacaatattactatcgcatacgta
aaaataactagtaccgaaccttatgtgcacacaacggaaatagctttaagcatcgagact
ttaaatagacataaagcaggattagtaaaattacttgaacattatattacaaataaattc
ttttcttatgatttgaatttatcaaagtataatgattatttgcatttgagtcgatag
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