Rickettsia rickettsii Colombia: RPL_03930
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Entry
RPL_03930 CDS
T01722
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
rrc
Rickettsia rickettsii Colombia
Pathway
rrc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rrc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RPL_03930 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rrc03021
]
RPL_03930 (rho)
03019 Messenger RNA biogenesis [BR:
rrc03019
]
RPL_03930 (rho)
Transcription machinery [BR:
rrc03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
RPL_03930 (rho)
Messenger RNA biogenesis [BR:
rrc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
RPL_03930 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_22
ATPase_2
AAA_25
OB_RNB
Fungal_virus_P2_C
Spore_III_AA
S1CSD-TOTE-2
NACHT
AAA
Mor
Motif
Other DBs
NCBI-ProteinID:
AFB23646
LinkDB
All DBs
Position
684091..685467
Genome browser
AA seq
458 aa
AA seq
DB search
MNTTNKESTAELNNTESNNNYNNFAENGNIINLKQLKRKLPEELQAQAEELKIENINSLL
KQELVFAILKKSVEQGVLIVGEGVLEVLPDGFGFLRSPEVNYLAGPDDIYISPSQIRRFG
LRTGDTVEGQIRAPKAGERYFALLKVNRVNFEDPSKAYHRVHFDNLTPLYPDEKLGLELE
NNSKDSKDFSTRVIELVAPMGKGQRALIVAPPRTGKTVLLQNIAHAITTNNPEVFLIVLL
IDERPEEVTDMQRSVRGEVVSSTFDEPASRHVQLAEMVIKKAKRLVEHKKDVVILVDAIT
RLARAYNTVVPSSGKVLTGGVDANALQRPKRFFGAARNIENGGSLTIIGTALIETGSRMD
EVIFEEFKGTGNSEIVLDRKIADKRIYPAIDITRSGTRKEDLLVDKIILNKMWVLRRIID
PMGSSEAIEFLLKKLENTKTNGEFFEMMKSPERPKNGL
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgaacacaactaataaagaatccacagcagaacttaacaataccgaatccaataacaat
tataataattttgcagagaacggtaatattattaatttaaaacaattaaaacgtaaatta
ccggaggaactacaagctcaagcagaagaattaaaaattgaaaatattaattcattactt
aaacaagaattagtttttgcaattttgaaaaaatccgtagagcagggagttttaatcgtg
ggagagggggtacttgaagtactacctgacggatttggttttttacgttcgccggaagta
aactacttagcaggccctgatgatatttatatttctcctagtcagattcgtcgctttggt
ctgcgtaccggtgatactgtagaaggtcagatcagagctccaaaagccggggaacgttat
tttgctttactgaaagtcaatagagtaaattttgaagacccttctaaagcttatcatcgt
gttcattttgataatttaacccccttataccctgatgaaaaattaggattagaacttgaa
aataatagtaaagatagtaaggattttagtacacgggttattgaacttgttgcccctatg
ggtaaaggacaacgtgcattaatagtagcaccgcctcgtacaggtaaaaccgtactatta
caaaatatagcacatgcaattacaaccaataatccggaagtatttttaatagtactgtta
atagacgaaagacctgaagaagtaaccgatatgcaacgttccgtacgtggggaggttgtt
agctctactttcgatgaaccggcaagtaggcacgtgcagcttgcagaaatggttatcaaa
aaagcaaagcgtttagtagaacataaaaaagatgtggtaattttagtagatgcgataaca
cgtttagctcgtgcttataatactgtagtgccgtcatcaggtaaagtattaacgggcggt
gttgatgctaatgctcttcagagacctaaaagatttttcggagcagcaagaaatattgaa
aacggcggttcgcttactataatcggtacggctttaattgaaaccggttctcgtatggat
gaggtaatttttgaggagtttaaaggtacaggtaattccgagatagttctagatcgtaag
attgccgataagcgtatttatccggctattgatataactagatcaggaactagaaaagaa
gatttattagtagataaaataatattaaataaaatgtgggtccttcgtcgtattatcgat
ccaatgggtagcagtgaagcaatagaatttttactcaaaaaacttgaaaatactaaaact
aacggtgagttttttgagatgatgaagagtcctgaacgtcctaagaacggtctatag
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