Rickettsia rickettsii Colombia: RPL_04180
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Entry
RPL_04180 CDS
T01722
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
rrc
Rickettsia rickettsii Colombia
Pathway
rrc03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
rrc00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
RPL_04180 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
rrc03011
]
RPL_04180 (rpsA)
Ribosome [BR:
rrc03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
RPL_04180 (rpsA)
Bacteria
RPL_04180 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
S1_2
OB_RRP5_4th
CSD
DUF2110
S1CSD-TOTE-1
RuvA_N
Motif
Other DBs
NCBI-ProteinID:
AFB23694
LinkDB
All DBs
Position
complement(721394..723100)
Genome browser
AA seq
568 aa
AA seq
DB search
MSIKLKQRFVPQLAAMNHKFAEDFSKMLETVDTSHIKEKTVVKGQVIEIKNDIIIVDVGL
KNEGRIPKSEFLALPEVGDVVEVFIETIEGRNGRTILSREKAVKEELWGQLEIMCSKGEF
VDGTIFGRVKGGFTVDLSGVVAFLPGSQVDVRPIKDPTSIMNIKQPFKILSMDKKLGNIV
VSRRAILEESRSEARDEMLSKIKEGMVLEGTVKNITDYGAFIDLGSVDGLLHLTDISWGR
VNHPSEVLDFNQKVKVMVIKFDEKTKRISLGIKQLDSNPWEAIKEEFPVGKQMTGKVTNF
ADYGVFIELKDGLEGLVHSSEISWLKSNQNPRKTLTIGQEVEFVVLEVDTEKHRVSLSIK
QCQENPLTKFAENNPVGTIIKAPIRNITDFGIFVALGNNMDGMIHEGDISWEDKGTALLK
SYKKGDEVECKVLAINIEKEQVSLGIKQLSPNPYQEISDEYKKGTIVKALITEVKDEGLE
VLLNDKVAGFIKSTELSDEKDEQKPEMFQIDKEIEAKVVSIEKSTGRILLSVKAHKIAER
QKALKAYGSSDNTTNMGDILANALEDKK
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgtcaataaaactaaaacaacgatttgttccacaacttgcagcaatgaatcacaaattt
gcagaagatttctctaaaatgcttgaaaccgttgatacaagtcatataaaagaaaaaacg
gtagttaaaggtcaagtaatcgaaataaaaaacgatataattattgtggacgttggatta
aaaaatgaaggtagaatacctaagtctgaatttttagctttacctgaagttggggacgta
gttgaagttttcatcgagacaattgaaggacgtaacggcagaacaatattgagccgtgaa
aaagcagttaaagaggaattatggggacaactagaaatcatgtgttccaagggcgaattt
gtcgacggtacgattttcggtcgtgtaaaaggaggctttaccgtggatttatctggtgta
gtagcattcttaccgggaagccaagttgacgttagacctattaaagatcctacttctata
atgaatatcaagcaaccgtttaaaattttaagtatggataaaaagcttggtaatatagta
gtttcaagaagagccattttagaagaatcacgttccgaagctagagatgagatgctatct
aaaattaaagaaggcatggtattagaaggaaccgtaaaaaatattactgattacggtgcg
tttatcgatcttggaagtgttgatggtttattacatttaaccgatatttcttggggaaga
gttaaccatccttcagaagtgttagactttaaccaaaaggttaaagtaatggttattaag
tttgatgaaaaaaccaaaagaatatcactcggtataaaacaacttgattctaacccatgg
gaagcaattaaagaagaattccccgtcggtaaacaaatgaccggtaaagttacaaatttt
gctgattacggcgtatttatagaattaaaagacgggcttgagggacttgttcattcaagc
gaaattagttggttaaaatctaatcaaaatcctagaaaaacgctaactatagggcaagaa
gtagaattcgtagttttagaggtcgatactgaaaagcatcgtgtttctttaagtattaaa
caatgccaagaaaatcctttaacaaagttcgctgaaaataatcctgtcggtactataatt
aaagcaccgattagaaatattacggatttcggtatttttgttgcactcggtaataatatg
gacggcatgattcatgaaggtgatattagctgggaagataaaggaacggctctattaaaa
tcatacaaaaaaggtgacgaagtagaatgcaaagttctagccattaatattgaaaaagaa
caagttagtttaggtataaaacaattgtcgccgaatccatatcaagaaatcagtgatgaa
tataaaaaaggcaccatagttaaagcccttataacagaagttaaagatgagggactcgaa
gtattattaaacgataaagtagcaggttttattaaaagcactgaactatcggatgaaaaa
gacgaacagaagcctgaaatgtttcaaatagacaaagaaatagaagcaaaagtggtttct
atcgagaaatcaaccggtagaattttattatcggtaaaagctcataaaatagcagaacgt
caaaaagctctcaaagcatatggttctagtgataatactaccaatatgggagatatactt
gctaatgctttagaagataagaagtaa
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