Rickettsia rickettsii Colombia: RPL_05080
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Entry
RPL_05080 CDS
T01722
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
rrc
Rickettsia rickettsii Colombia
Pathway
rrc00300
Lysine biosynthesis
rrc00550
Peptidoglycan biosynthesis
rrc01100
Metabolic pathways
rrc01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
rrc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RPL_05080
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RPL_05080
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
RPL_05080
Enzymes [BR:
rrc01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
RPL_05080
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GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
AFB23850
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Position
complement(859128..860477)
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AA seq
449 aa
AA seq
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MIWNSKTLSAVLGITISNSINCNEVQFNSKDVKKGNLFIALQGNRDGHDYVLDAIDKGAA
AVIISKRVEINDKDKIILVDDCFEALQKMALYKRENSKAKFIAITGSVGKTSTKEALKVL
LQHDFLVFASRGNFNNKLGMLINLASMADDTEYAIFELGMNHQGEIRELVQILKPNIAMI
TNISEAHLEFFNSLEEIAEAKCEIFANFSKNDIAVINADTNCYNKILSILKNLSITDIHS
FGRSAKTSAELMLYENLGEQVYLKYKINNKVLDVTIPFIPRHFTENYTGVLLIIDILGKD
IEIAANHLANISPTKGRGEIINIQNCRVICDYYNASPQSMKAALEYLKQVPAENKTAIIG
DMLELGENSKRLHEKLVQYILDAACSKVYLVGVNTKYIDDLLPSKIAKKYFKNVDELITH
ITDLFEGNELILIKGSRGVKLDKIVDYYK
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgatctggaattctaaaactttaagtgctgttctcggtataacaatctctaattctata
aattgtaatgaagtgcaatttaattccaaagatgttaaaaaaggtaatttatttatagca
cttcaaggtaatagagatggtcacgattatgttctagatgcaatagataaaggagcagca
gccgtaattattagtaagcgagtagagatcaatgataaagataaaattatcttagtagat
gattgttttgaagctctacaaaaaatggctttatataaacgagagaattcaaaagctaaa
tttatagctataacaggcagcgttggtaaaacttctacaaaagaagcactgaaagtatta
ttacaacatgattttctagtttttgctagccgaggtaacttcaataacaaactcggtatg
cttattaatcttgcttcaatggctgatgatacggaatatgctatttttgagcttggcatg
aaccatcaaggtgaaataagagagctggttcaaatattaaagccgaatattgccatgatt
actaatatttcagaggctcatttagaattttttaactcgcttgaagagatagctgaagct
aaatgtgagatttttgcaaattttagcaaaaatgatattgccgttattaatgccgatact
aattgctataacaaaatattatcgatattaaaaaacctttctatcaccgatatacatagc
ttcggtagatcagctaaaacttcagcagaattaatgttatatgagaacctaggagagcaa
gtctacttaaagtataagataaataataaagtcttagatgtaacgataccgtttattcct
cggcattttaccgaaaattataccggtgtacttttaattatcgatatattaggtaaagat
atagagatagctgcaaatcacttagcaaatatttctcctactaaaggaagaggggaaatt
atcaatatacaaaattgtcgtgtaatttgtgattactataacgcaagtccgcagtcaatg
aaagctgcattagaatatttaaaacaagtacctgccgagaataaaactgctataataggc
gatatgctagagctaggggaaaattctaaacgattacatgagaaactagtgcagtacata
ttagatgctgcttgttctaaggtctatttagtaggagtaaatactaaatatattgatgat
ttactaccttccaaaatagctaaaaaatactttaaaaatgttgatgaattaattacgcat
attacggatttatttgaaggtaatgagctgattctaataaaagggtcaagaggcgtaaaa
cttgataagattgttgattattataaataa
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