Rubrobacter radiotolerans: RradSPS_0006
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Entry
RradSPS_0006 CDS
T03080
Name
(GenBank) gyrA: DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
rrd
Rubrobacter radiotolerans
Brite
KEGG Orthology (KO) [BR:
rrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rrd03032
]
RradSPS_0006
03400 DNA repair and recombination proteins [BR:
rrd03400
]
RradSPS_0006
Enzymes [BR:
rrd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
RradSPS_0006
DNA replication proteins [BR:
rrd03032
]
Prokaryotic type
DNA Topoisomerases
RradSPS_0006
DNA repair and recombination proteins [BR:
rrd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RradSPS_0006
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
GrpE
Motif
Other DBs
NCBI-ProteinID:
AHY45289
UniProt:
A0A023WZQ3
LinkDB
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Position
6763..9372
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AA seq
869 aa
AA seq
DB search
MLDTFSGNIQPHPIEDEIKDSFLSYAMSVIVSRALPDVRDGLKPVHRRVLYAMNDLGLQP
NRPYRKSATVVGEVIGKYHPHGDSAVYDTLVRLAQDFSMRYKLVDGQGNFGSVDGDPAAA
MRYTEARLARMATEMLRDINADTVDFVPNFDESQTQPSVLPARFPNLLVNGSEGIAVGMA
TKIPPHNLGEVIDATVALIDDPELDDAGLARHIKGPDFPTAGIIVGLSGIKSAIETGRGS
IRVQAKAHTEQMRGNRTQIVVTEIPYQVNKSYLLQKIAELVKDRKLDGISDLRDESDRNG
MRIVIELKRDAVPKVVINNLYKHTQMQQTFGVNLVALVDGVPRQLSYKEALRHYIVHQFE
VVTRRTRYELARAQARAHILEGLLKALDNLDEVVATIRRSRSVETARNNLIKAFKLSERQ
AQAILDLRLQRLTAMERRKVEQEYRDLMEKIEYLESLLADEAKIYGVIKDELAEIKAAYA
DERKTQITAEEGVDFDVEDLIAEEEMVISISKGGYLKSVPVNTFRKQGRGGVGVAGMDLK
EGDYIDHLFITTTHHYMLFFTNKGKVYRLKVHQMPRMSRTAKGRHIANLLPLAQGERIAA
VKATKNFDEADYLVFATKEGTVKKTRFQDYNTPLKNDGIIAINLAEGDELIDVRHASEGD
EIILVTRDGKAMRFRQSDARAMGRATGGVKGVTLRGDDHVLSMEVISDEAADLFMITEKG
FGKRTPLSQFPTKGRGGQGVIAMKTDRGERGRLAGVQVVKPGTHELMLVSNVGTTIRMDC
ASVSQQGRAAQGVRVMNLREGDTVSALAKVVASRGEDAQGTSDELSLDDITGEEVTGESS
AGPREPGTDEPGLSVLVEESENGTDGTGG
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgcttgataccttttcggggaacatccagccccacccgatagaagacgagataaaggac
tcattcctctcctacgcgatgagcgtgatcgtctcgcgcgccctgccggacgtgcgcgac
ggcctcaagcccgtccaccggcgggtcctctacgcgatgaacgacctcggccttcagccg
aaccggccgtaccgcaagagcgcgaccgtcgtcggggaggttatcggtaagtaccacccg
cacggcgactcggccgtctacgacacgctcgtgaggctcgcgcaggacttctcgatgcgc
tacaagctcgttgacggacaggggaacttcggaagcgtggacggcgacccggcggcggcg
atgcgctacaccgaggcccggctcgcccgcatggcgacggagatgctgcgggacatcaac
gccgacacggtggacttcgtcccgaacttcgacgagagccagacccagccgagcgtgctt
ccggcacgcttcccgaacctgctcgtaaacggctcggagggcatcgcggtcgggatggcg
acgaagatcccgccgcacaacctcggtgaggtcatagacgcaacggtcgcgcttatcgac
gacccggagctcgacgacgcggggctcgcgcggcacataaaaggaccggacttcccgacg
gcggggatcatcgtcgggctctctgggataaagagcgccatcgagacggggcgcggttcg
atccgggtccaggcaaaggcgcataccgagcagatgaggggtaaccggacccagatcgtg
gttaccgagatcccctaccaggtcaacaagagttacctcttgcagaagatcgccgagctg
gtcaaggaccgcaagctcgacggcatctcggacctgcgcgacgagtccgaccggaacggc
atgcgcatcgttatcgagctcaagcgcgacgccgtgccgaaggtcgttataaacaacctc
tacaagcacacccagatgcagcagaccttcggggtgaacctcgttgcgctcgtggacggg
gtaccgaggcagctctcctacaaggaggcgctcaggcactacatcgtccaccagttcgag
gtcgttacgcgaaggacgcgctacgagctcgccagagcccaggcgcgggcgcacatcctc
gaagggctcctcaaggcgctcgacaacctcgacgaggtcgtggctaccatccgccggagc
cggagcgtcgagacggcgcgaaacaaccttataaaggcgttcaagctctcggagcgtcag
gcgcaggcgatactggacctccggctgcagcggctcacggcgatggagcgtcggaaggtc
gagcaggagtacagggacctgatggagaagatcgagtacctggagagcctgctcgccgac
gaggcgaagatctacggagtcataaaggacgagctcgccgagataaaggcggcctacgcc
gacgagcggaagacccagatcacggccgaggagggcgtggacttcgacgtcgaggacctt
atcgccgaggaggagatggtcatctccatctccaagggcggctacctgaagagcgttccg
gtcaacaccttccgcaagcagggtcgcggcggggtcggggtcgcggggatggacctcaag
gagggggactacatagaccacctctttataacgaccacgcaccactacatgctgttcttt
acgaacaagggcaaggtctaccgtctgaaggtccaccagatgccgcgcatgagccgcacg
gcgaagggccggcacatagcgaacctcctgccgctcgcgcagggcgagcgcatcgccgcc
gtcaaggctacaaagaacttcgacgaggcggactacctggtctttgcgacaaaggaaggg
acggtcaagaagacccgcttccaggactacaacacgccgctcaagaacgacggcatcatc
gcgataaacctcgccgagggcgacgagctcatagacgtgcgccacgcttcggagggggac
gagatcatcctcgtgacccgggacggaaaggcgatgcgcttccggcagtcggacgcgcgg
gcgatgggccgcgcgaccgggggcgtcaagggcgttacgctcagaggcgacgaccacgtc
ctctcgatggaggtcatctccgacgaggcggcggacctgttcatgatcacggagaagggc
tttggcaagcggaccccgctctcgcagttcccgacaaagggtcgcggcggtcagggcgtt
atagcgatgaagaccgaccggggcgagcgcgggcggctcgcgggggtccaggtcgtgaaa
ccgggcacgcacgagctgatgctcgtctcgaacgtcgggaccaccatccgcatggactgc
gcctctgtttcgcagcagggccgggcggcacagggcgtgcgggtgatgaaccttcgcgag
ggcgataccgtgagcgcgctcgcgaaggtcgtcgcctcccggggcgaggacgcccagggc
acctccgacgagctctcgctcgacgacatcaccggcgaggaggtgaccggcgagtcgagc
gcgggtccccgcgagcccggtaccgacgaaccggggctcagcgtgcttgtcgaggagtcc
gagaacggcacggacggaacaggaggctag
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