Rubrobacter radiotolerans: RradSPS_0254
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Entry
RradSPS_0254 CDS
T03080
Name
(GenBank) dnaq: exonuclease, DNA polymerase III, epsilon subunit family
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rrd
Rubrobacter radiotolerans
Pathway
rrd03030
DNA replication
rrd03430
Mismatch repair
rrd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rrd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RradSPS_0254
03430 Mismatch repair
RradSPS_0254
03440 Homologous recombination
RradSPS_0254
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rrd03032
]
RradSPS_0254
03400 DNA repair and recombination proteins [BR:
rrd03400
]
RradSPS_0254
Enzymes [BR:
rrd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RradSPS_0254
DNA replication proteins [BR:
rrd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RradSPS_0254
DNA repair and recombination proteins [BR:
rrd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RradSPS_0254
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
UVR
RNase_H_2
DUF7508
DNA_pol_A_exo1
DEDDh_C
GIY_YIG_domain
Motif
Other DBs
NCBI-ProteinID:
AHY45537
UniProt:
A0A023WZ93
LinkDB
All DBs
Position
279660..281489
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AA seq
609 aa
AA seq
DB search
MSPSLYGFVRERGPVSPEEVASGFLSMPDLNGDARSRVELLTEGDPRFVWDEGLLRTADL
GGCALREVPFVVFDLETTGSSAKEGRITEFGAVKLVGGEVREKFTTLVNPERHIDPFVTR
LTGITDEMVAGAPKVGEVLPLFEEFVEGTVLVAHNARFDCAFVEAARGASLPNPVLDTLK
LARMLVPGLRRYRLSSLATHLGVRQVPNHRAFADASVTAEVFVKLLSLLQKVGVGTVGEA
LALKGSKLAKIKPQKQHLAKDLPQTPGVYYFLDKDGVVLYVGKAKNLRSRVRTYFNGGDG
RRKIGRLVEQVAEVSVRETGTELRALILEAKEIRRLLPRFNSAGRSDRPGWFLKLDTAQE
YPVPERVPESEAEKEAVLIGPYRSARSVDACTEALGRIFPIRRCDGAPGGPDGPCFYGQL
GRCGPCNGMSPEEYEREVVGGISALLRGEGGEEHLAALVAERSRLARALEFEAAARLRDL
IAGIERVRFTRTLVKSEGLQAIVAPSTEPEVFEVFVLSGGRLVAHESFSRTDAGAVREFA
ASALKLARRPLAEGQGAGEARVVAAYLRRRAPFFEAAPLAVAGDLVSLVGRAVERSGEEE
ADAGAGKGE
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
gtgtcccctagcctctacggtttcgtaagggaacgcggacctgtgagcccggaggaggtc
gcctccgggttcctttccatgccggacctcaacggcgacgcccgctcgcgagtcgagctt
ttgaccgagggcgacccgcgctttgtctgggacgaggggcttctcaggacggccgacctc
ggcgggtgcgcgctccgggaggtcccgttcgttgtctttgaccttgagacgaccggctcc
tcggcgaaggaggggaggatcacggagttcggggcggtgaagctcgtcggcggagaagtc
cgggagaagttcacgacgctcgtgaaccccgagcggcacatagatccgttcgtcacgcgc
ctgaccgggataacggacgagatggtcgccggagcgccgaaggtcggagaggtgctgccg
ctctttgaggagtttgtcgaggggacggtgctcgttgcgcacaacgcgcgctttgactgc
gcctttgtcgaggcggcgcgaggcgcgagcctgccgaacccggtcctcgacacgctgaag
ctcgccaggatgctggtgcccggcctgaggcgctacaggctctcctcgctcgcgacgcac
ctcggggtgaggcaggtcccgaaccaccgggccttcgccgacgcctcggtaaccgccgag
gtctttgtgaagctgctctcgctgctccagaaggtcggggtcgggaccgtcggggaggcg
cttgctctaaagggatcgaagctcgcgaagataaagccccagaagcagcacctcgcaaag
gacctcccgcagacgccgggggtctactactttctggacaaggacggcgtcgttctgtac
gtcgggaaggcgaagaacctccggtcgagggtcaggacgtacttcaacggcggggacggc
aggaggaagatcggccgcctcgtcgagcaggtcgccgaggtgagcgtccgggagaccggg
accgagctgcgggcgctgatcctggaggcgaaggagatccggcgcctcctgccgcgcttc
aactccgccgggaggtccgaccggcccggctggttcttgaagctcgacacggcgcaggaa
tacccggtaccggagcgcgtcccggagagcgaggcggagaaggaggcggtcctgatcggc
ccctaccggagcgcccgctcggtagacgcctgcaccgaggcgctcggacgcatcttcccg
atccggcgttgcgacggcgcacccggcggtcctgacgggccgtgcttctacggacagctc
ggacgctgcgggccgtgcaacgggatgagccccgaggagtacgagcgagaggtcgtgggc
gggatctcggccctcctgcgcggtgaggggggcgaggagcacctggcggcgctcgtcgcc
gagcggagcaggctcgcgagggctctggagttcgaggcggctgcgaggctccgggacctt
atagccgggatagagcgcgtccggttcacgaggacgctcgtgaagagcgaggggcttcag
gcgatcgtcgcgccctcgacggagccggaggtcttcgaggtcttcgtgctttcgggcggg
cggctcgtcgcgcacgagagcttctcccggacggatgccggagcggtccgggagttcgcc
gcatcggccctgaagctcgcccgaagaccgcttgcggagggacagggggccggcgaggcc
cgggtggtcgccgcgtacctgaggcggagggcgccgttcttcgaggccgcgccgcttgca
gtggcgggtgacctcgtctcgcttgtcggccgcgcagtagagcgctccggcgaggaagag
gccgatgccggagccgggaagggcgagtag
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