| Entry |
|
|---|
| Name |
(GenBank) 2'-5' RNA ligase superfamily
|
|---|
| KO |
|
|---|
| Organism |
rrd Rubrobacter radiotolerans
|
|---|
| Brite |
KEGG Orthology (KO) [BR:rrd00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:rrd03016]
RradSPS_0309
Enzymes [BR:rrd01000]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
RradSPS_0309
Transfer RNA biogenesis [BR:rrd03016]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
RradSPS_0309
|
|---|
| SSDB |
|
|---|
| Motif |
|
|---|
| Other DBs |
|
|---|
| LinkDB |
|
|---|
| Position |
complement(329386..330099)
|
|---|
| AA seq |
237 aa
MDSFERAWREFKQERRLEFGGHTDPDWRGEHDLSAAFILPVDTEVFSERLGPLREALSRF
SFVSLHPDHFMHVSLVIVGFVEPSGREAEGTVTQGSLKKISSKAKEALADFSPFEVHLQG
LGAFPAAAYVEAHENGEIDALRRVLRECCGLEPFEREGPPHLTLAYFKAENGTAAPPELI
STVERYRDWYVGSFTAREVQLSLLDLTQEYARFEPVARIPLATRKDPKSDRTSRGGA |
|---|
| NT seq |
714 nt +upstreamnt +downstreamnt
atggacagcttcgagcgagcctggcgcgagttcaagcaggagagacggctggagttcggc
gggcacaccgacccggactggcgcggcgagcacgacctctcggcggcctttatcctcccg
gtggatacggaagtcttctcggagcgcctgggccccttgcgcgaagccctctcgcgattt
tcgttcgtctcgctccatccggaccacttcatgcacgtctcgctcgtgatcgtcggcttc
gtcgagccgtccggccgggaggcggaggggactgttacgcagggctctctgaagaagatc
tccagcaaggcaaaagaggcgcttgcggacttcagccccttcgaggtgcaccttcagggg
ctcggggcgttcccggccgcagcctacgtcgaggcccacgagaacggggagatagacgcc
ctgcgaagagttctccgggagtgctgcggccttgagcccttcgagcgcgaaggacctccg
cacctgacgctcgcctacttcaaggccgagaacggcaccgcagcgccgccggagctgatc
tcgaccgtcgagcgctaccgggactggtacgtcggctccttcacggcgcgcgaggtccag
ctctcgctgctcgacctcacgcaagagtacgcgcgcttcgagcccgtagcccggataccg
ctcgctacgcggaaggatccgaagagtgatcgaacgtctcgcggtggagcatga |
|---|
