Rubrobacter radiotolerans: RradSPS_0373
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Entry
RradSPS_0373 CDS
T03080
Name
(GenBank) sigma70-ECF: RNA polymerase sigma factor, sigma-70 family
KO
K03086
RNA polymerase primary sigma factor
Organism
rrd
Rubrobacter radiotolerans
Pathway
rrd02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
rrd00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
RradSPS_0373
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rrd03021
]
RradSPS_0373
Transcription machinery [BR:
rrd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RradSPS_0373
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
Sigma70_r4_2
CCDC85
UCR_14kD
Motif
Other DBs
NCBI-ProteinID:
AHY45656
UniProt:
A0A023X0D8
LinkDB
All DBs
Position
397815..398651
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AA seq
278 aa
AA seq
DB search
MTDVISQYMEKVRRGRLLGPEEEVSLARRSRRGDRSARRKLIESNLRLVISIAKKYRGRG
LDFEDLIQEGNAGLIRAVEKFDPERGFRFSTYATWWIRQAVTRAVADHARSIRLPAHVVD
AIYRLRRTESALGIELGREATEDEVARRLEVPVEEVRRLREISQPISSMNARLGRDEDAS
EVGELFHDETSRSEYFGVESGPWVAKLREAIRALPEREARILRMRHGFEDGGTRTLREVS
EELGISQERARQVEKKALRTIRSGRYASTLRGALPEAV
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
gtgacggacgtgatctcacagtacatggagaaggtcaggcggggcaggctgctcggcccg
gaggaggaggtctcgcttgccaggaggtcccggcggggggaccggtcggcgagaaggaag
cttatcgagtcgaacctgcggctcgttatctcgatcgccaagaagtaccgcggccgggga
ctcgacttcgaggaccttatccaggagggcaacgccgggcttatccgcgccgtcgagaag
ttcgacccggagcgaggcttccgcttttcgacgtacgcgacgtggtggatacgtcaggcc
gttacccgcgccgttgcggaccacgcccgctccatccggcttccggcgcacgtcgttgat
gcgatctaccgcctgagaaggaccgagagcgcgctcgggatcgagcttggtcgcgaggcg
acggaggacgaggtcgcccggcggcttgaggtcccggtcgaagaggtccggcggctccgg
gagatcagccagccgatcagcagcatgaacgcccgcctcgggcgcgacgaggacgcctcg
gaggtcggggagcttttccacgacgagacctcccgctccgagtacttcggggtcgagtcc
ggcccgtgggtcgcgaagctccgcgaggccatccgtgcccttcccgagcgcgaggcccgg
atactccggatgcgtcacggcttcgaagacggcggcacccggacccttagagaagtctcc
gaagagctcggcatctcgcaggagcgggctcgtcaggtcgagaagaaggcgctgcgcacg
atccgctccggacgttacgccagcaccctgcgcggcgctctgcccgaggccgtctag
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