Rubrobacter radiotolerans: RradSPS_0516
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Entry
RradSPS_0516 CDS
T03080
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
rrd
Rubrobacter radiotolerans
Pathway
rrd00550
Peptidoglycan biosynthesis
rrd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rrd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RradSPS_0516
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rrd01002
]
RradSPS_0516
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rrd01011
]
RradSPS_0516
Enzymes [BR:
rrd01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
RradSPS_0516
Peptidases and inhibitors [BR:
rrd01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
RradSPS_0516
Peptidoglycan biosynthesis and degradation proteins [BR:
rrd01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
RradSPS_0516
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
Beta-lactamase2
PBP5_C
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
AHY45799
UniProt:
A0A023X156
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All DBs
Position
556170..557501
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AA seq
443 aa
AA seq
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MSFHRTSTGPQGSRRYRTGRKTGAPGTFAALFLVAAALLLFAGVWTPAAVSQEERRSTAP
GATQYREPGVEVAPGVSPELPPEVEPPEVGAGAWVLTDAESGEVLAGRDSGREVPMASTT
KIMTALVALRNTDDLDEPVRVSPFAASFAIPEYSNAGLVEGDVLSVRELVLATLIVSGND
AATALAEHVGGGGGREGVERFVGMMNQEARRLGLSETHFANPTGLDERDHHSSARDLAEM
TRVALEEPLFRETVATRYASVTVEGAAGERTVELANLNELLYVYPGATGVKTGTSPGAGP
SLVASATDGEGESYTSVVLDAPDRYGATVAILDYGFAAYERVPLVREGELFERVEMPYRR
DERVRLVAARDVAALVDADSEFTTRTSVVEDLPDSAQRGERLGEVVLLVDGERAGAAPLV
AAEGYEEAGPLQRLGYNVSRLWN
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
ttgagtttccaccgcacatcgaccgggccgcagggttcgcggcggtaccggaccggacga
aagaccggggctccggggaccttcgcggccctctttctcgttgcagccgcgctcctcctc
ttcgccggggtctggacgcccgcggccgtctcgcaggaggagaggaggagcaccgccccc
ggagctacgcagtacagagaacccggggtggaggtcgctcccggggtctccccagagctt
ccgcccgaggtggagccgccggaggtcggggccggggcctgggttctcaccgacgccgag
agcggcgaggtgctggccggcagggactccgggcgcgaggtcccgatggcctcgacaaca
aagataatgaccgcccttgtcgccctgaggaacaccgacgacctcgacgagcccgtgcgc
gtctcgccgtttgcagcttccttcgccatccccgagtacagcaacgccgggctcgtcgag
ggggacgtcctgagcgtccgggagcttgtccttgcgacgctcatcgtctccggcaacgac
gcggcgaccgcgctcgccgagcacgtcgggggcggcggcgggcgcgagggcgtcgagcgg
ttcgtcgggatgatgaaccaggaggcgcggaggctcgggctctcggagacgcactttgca
aacccgaccggcctcgacgagcgggaccaccactcaagcgcccgcgacctcgccgagatg
acgcgcgtcgcccttgaagagccgctcttccgcgagaccgtcgccacccgctatgcgagc
gtaacggtcgaaggggcagccggggagcgcacggtcgagcttgcgaacctcaacgagctt
ctctacgtctacccgggagcgaccggcgtaaagaccgggacctcgcccggagccggcccg
agcctcgtcgcaagcgcaaccgacggcgagggagagagctacacgagcgtcgttctcgac
gccccggaccgctacggagccacggtagccatcctcgactacggcttcgccgcctacgag
cgcgtcccgcttgtccgggagggagagctcttcgagcgggtcgagatgccctaccgcagg
gacgagcgcgtccggctcgtcgccgcccgggacgtcgcggcgctcgtggacgccgacagc
gagttcacgacccggacgagtgtcgtcgaggaccttcccgactccgcacagcggggcgag
aggctcggggaggtcgtactcctggtggacggcgaacgcgccggagcggccccgctcgtc
gccgccgaaggctacgaggaggccggacccttgcagcggctcggctacaacgtctcccgg
ctctggaactag
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