Rubrobacter radiotolerans: RradSPS_1390
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Entry
RradSPS_1390 CDS
T03080
Name
(GenBank) dsRNA-specific ribonuclease
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
rrd
Rubrobacter radiotolerans
Brite
KEGG Orthology (KO) [BR:
rrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rrd03019
]
RradSPS_1390
03009 Ribosome biogenesis [BR:
rrd03009
]
RradSPS_1390
03036 Chromosome and associated proteins [BR:
rrd03036
]
RradSPS_1390
Enzymes [BR:
rrd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
RradSPS_1390
Messenger RNA biogenesis [BR:
rrd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
RradSPS_1390
Ribosome biogenesis [BR:
rrd03009
]
Eukaryotic type
90S particles
RNase
RradSPS_1390
Prokaryotic type
rRNA processing factors
RradSPS_1390
Chromosome and associated proteins [BR:
rrd03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
RradSPS_1390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
Ribonucleas_3_3
Ribonuclease_3
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
AHY46673
UniProt:
A0A023X2W6
LinkDB
All DBs
Position
1463732..1464394
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AA seq
220 aa
AA seq
DB search
MTIKDLVEILPEPLRQRALTHPSVADPYDSNGRLEFLGDSVLNTRVAELVFHGYPELLEG
DLTRIRTHLVRKTFLASVGRSEGLEEEIQSSVINDSVIADTVEAIIGAAYLIDKFLVLET
IDRIFDPTGIDKDELRDWKTLLQETLQADGLRPTYRVISKQGPAHAPVFVSGVCIDGSEV
ASGRGTSIKESEQSAARSALEILGVRPAPQTEEVEAPVGA
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgaccataaaggaccttgtagagattcttccggagcccttgcgacagcgggcgctgacg
cacccgagcgtcgcggacccctacgactcgaacggtcggctggagtttctcggggattcg
gtcctgaacacccgggtcgccgagcttgtctttcacggctatccggagcttcttgaaggc
gacctgacgcgcatccggacgcacctcgtgcgcaagacgttccttgcgagcgtcgggcgg
agcgaggggcttgaggaggagatccagtcctccgtaataaacgactcggttatcgcggac
acggtcgaggcgataatcggggcggcctaccttatagacaagttccttgtgctcgaaaca
atagaccgcatcttcgacccgaccggtatcgacaaggacgagctgcgcgactggaagacc
cttcttcaggagacgctccaggccgacggcctgaggccgacctaccgcgtgattagcaag
cagggaccggcgcacgcgccggtctttgtctcgggtgtctgcatcgacggctcggaggtc
gcctcgggccgggggacctcgataaaggagagcgagcagtccgccgcgcgctccgccctt
gagatactcggcgtccgtcccgctccgcaaaccgaggaggtcgaagccccggtcggggcc
tag
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