Rubrobacter radiotolerans: RradSPS_1420
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Entry
RradSPS_1420 CDS
T03080
Name
(GenBank) TruB: tRNA pseudouridine(55) synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rrd
Rubrobacter radiotolerans
Brite
KEGG Orthology (KO) [BR:
rrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rrd03016
]
RradSPS_1420
Enzymes [BR:
rrd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
RradSPS_1420
Transfer RNA biogenesis [BR:
rrd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
RradSPS_1420
Prokaryotic type
RradSPS_1420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
AHY46703
UniProt:
A0A023X2Z0
LinkDB
All DBs
Position
1492136..1492990
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AA seq
284 aa
AA seq
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MLPVDKPTGATSARAVAAVKRALPRGTKVGHTGTLDPLASGLLVLLVGRATRLARYVGEG
EKLYTAEARFGAVSDSLDADGEMTPVGGDLPTRSEIEAALPRFTGEVEQVPPMASAVKVG
GRRLYALHREGKSVERESRVVLVREFVLLDYRDGRATFRVRCGGGTYVRSLVADLAESVG
SGAYLSALRREAVGEFRLEDALPVGEVTPERVQKTLLGARAALGGMRERTVPESLRRLVT
NGRTLPSSGAQETVAMVSETGELLAVYRDDGEHFARPEVVLCAG
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
gtgctgcccgtcgacaagccgaccggcgcgacgagcgcgcgggccgttgcggcggtgaag
cgcgcgctgccgcgagggacgaaggtcgggcacacggggacgctcgaccctctcgcctcc
gggctcctcgtgctgctcgtcggacgggctacgcggctcgcgcgctacgtcggtgagggg
gagaagctctacaccgccgaggcgcgcttcggggccgtctccgactcgctcgacgccgac
ggtgagatgacgcccgtcgggggtgatctcccgacaaggtcggagatagaggccgcgctt
ccccgctttaccggggaggtggagcaggtcccgccgatggcctcggcggtgaaggtcggg
ggccggaggctctacgcgctgcaccgggaggggaagagcgtcgagcgcgagagccgcgtc
gttcttgtccgggagttcgttctgctcgactaccgggacgggagggcgactttccgggtg
cgctgcggcggcgggacgtatgtccggtcgctcgttgcggaccttgcggagtcggtcggg
tcgggggcgtacctgagcgcgctccggcgcgaggcggtcggggagtttcgcctggaggac
gcgctcccggtcggggaggttacacccgagcgggtacaaaagacgcttctcggggcgcgg
gccgcgctcggcgggatgcgcgagcggaccgtcccggagtcgctccggcggctcgttacg
aacggccggacgctcccgtcgtcgggggcgcaggagaccgtggcgatggtctcggagacc
ggggagttgctcgcggtgtacagggacgacggggagcacttcgcccgcccggaggtggtg
ctttgcgcggggtag
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