Rubrobacter radiotolerans: RradSPS_1462
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Entry
RradSPS_1462 CDS
T03080
Name
(GenBank) Geranylgeranyl pyrophosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
rrd
Rubrobacter radiotolerans
Pathway
rrd00900
Terpenoid backbone biosynthesis
rrd01100
Metabolic pathways
rrd01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rrd00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
RradSPS_1462
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
rrd01006
]
RradSPS_1462
Enzymes [BR:
rrd01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
RradSPS_1462
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
RradSPS_1462
2.5.1.29 geranylgeranyl diphosphate synthase
RradSPS_1462
Prenyltransferases [BR:
rrd01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
RradSPS_1462
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
AHY46745
UniProt:
A0A023X411
LinkDB
All DBs
Position
complement(1536504..1537397)
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AA seq
297 aa
AA seq
DB search
MAEAGLERWESHRLVFEEYLEGLTFTEEPELSTLQEAMRYSMLAGGKRVRPTLCMEVARI
FGAEPELALPSAAAIELIHTYSLIHDDLPAMDDDDFRRGRPTLHRKYDEAMAILAGDAFF
GEALTLITVHQQGTPEQILAVVRELADSTGVEGMVGGQVLDMAQTGLGSETDPRTLRMIH
RFKTGALIKSSARIGAIVAGASEPESDAVSEYAAELGLCFQIVDDLLNATSTTEALGKSA
GSDEEQGKATFVGVFGLDGARREADESTARALAALKRISGDTSGLRGLALFVRHRGS
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
gtggctgaggctggtcttgagcggtgggagtctcaccggctcgtcttcgaggagtacctt
gaggggctcaccttcaccgaggagccggagctctctaccttgcaggaggcgatgcgctac
tcgatgctcgccgggggcaagcgcgtccggccgaccctgtgcatggaggtcgcgaggatc
ttcggcgcggagccggaactcgcgctgccctcggcggcggcaatagagcttatccatacg
tactccctgatccacgacgacctcccggcgatggacgacgacgacttccggcgcggtcgt
ccgacgcttcaccggaagtacgacgaggcgatggcgatactcgccggggacgccttcttc
ggcgaggcgctcacgcttataacggtccatcagcagggaactccggagcagatcctcgcg
gtcgtgcgcgagcttgcggactcgaccggggtagaggggatggtcggaggccaggtgctc
gacatggctcagaccgggctcggctcggagaccgacccgaggaccctgcgcatgatccac
cgcttcaagacgggggcgctcataaagtcctctgcgcgcatcggggcgatcgtcgccggg
gcatctgagccggagtcggatgcggtctcggagtatgcggcggagcttgggctgtgcttc
cagatcgtcgacgacctcctcaacgcgacctccaccaccgaggcgctcggcaagagcgcc
gggagcgacgaggagcagggcaaggcgacgtttgtcggggtattcggtctcgacggggcg
cggcgggaggccgacgagtcgaccgcccgggccctggcggcgctaaagaggatctctggc
gacacttcgggcctcaggggcctcgcgctctttgtccgccaccggggcagctag
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