Rubrobacter radiotolerans: RradSPS_1590
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Entry
RradSPS_1590 CDS
T03080
Name
(GenBank) Glycine/serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
rrd
Rubrobacter radiotolerans
Pathway
rrd00260
Glycine, serine and threonine metabolism
rrd00460
Cyanoamino acid metabolism
rrd00630
Glyoxylate and dicarboxylate metabolism
rrd00670
One carbon pool by folate
rrd00680
Methane metabolism
rrd01100
Metabolic pathways
rrd01110
Biosynthesis of secondary metabolites
rrd01120
Microbial metabolism in diverse environments
rrd01200
Carbon metabolism
rrd01230
Biosynthesis of amino acids
rrd01240
Biosynthesis of cofactors
rrd04981
Folate transport and metabolism
Module
rrd_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
rrd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RradSPS_1590
09102 Energy metabolism
00680 Methane metabolism
RradSPS_1590
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RradSPS_1590
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
RradSPS_1590
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
RradSPS_1590
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
RradSPS_1590
Enzymes [BR:
rrd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
RradSPS_1590
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GFIT
Motif
Pfam:
SHMT
Beta_elim_lyase
EF-hand_1
EF-hand_6
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AHY46873
UniProt:
A0A023X3E7
LinkDB
All DBs
Position
complement(1662956..1664179)
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AA seq
407 aa
AA seq
DB search
MIGPYTEVIDSEVQSALDGELERQRTTIELIASENFTSPAVLAAQGSVLTNKYAEGYPGK
RYYGGCEQVDKVEQLAIDRAKELFGADHVNVQPHAGAQANEAAYSVLLEPGDKVLAMDLA
AGGHLTHGMKLNFSGRLYEFVHYGVDKNGYIDYDEVRNIALRERPKLIVAGASAYPRIIE
FDKFRAVADEVGAKFMTDMAHIAGLVAAEVHPSPVPHCEIVTTTTHKTLRGARGGMVLCR
EEFAKKLNSRVFPGLQGGPLMHAIAGKAVAFGEALQPEFRQYAQSIVDNARAMAEGLLEG
GVNLVSGGTDNHMMLVDLRGTGTTGKELEGRLEEVGVTCNKNMVPNDPEGPMVTSGVRLG
TPAMTTRGMGEDEMREIAAIIAKTVHGETQGLRERVAILTDAFPLYG
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgatcggcccttacacagaagtcattgactccgaggtgcagagcgccctcgacggggag
ctggagcgccagcggacgacaatagagctgatcgcgagcgagaacttcacctcgcccgcc
gtgctcgccgctcagggctcggtcctgacgaacaagtacgccgagggctacccgggaaag
cgctactatggcggctgcgagcaggtggacaaggtcgagcaactcgcgatcgaccgggca
aaggaactcttcggggccgaccacgtgaacgtccagccccacgccggagcccaggccaac
gaagcggcctactcggtgctgctcgaacccggagacaaagtccttgcaatggacctcgcc
gccggaggacacctgacccacggcatgaagctgaacttcagcggaaggctctacgagttc
gtgcactacggcgttgataagaacggctacatcgactacgacgaggttcgcaacatcgcc
ctgagggagcggccgaagctgatcgtggccggagcgagcgcctacccgcgcatcatcgag
ttcgacaagttccgcgccgtcgcggacgaggtcggcgcgaagttcatgacggacatggcc
cacatcgcaggtctagttgcagcagaggttcacccttcacctgtacctcactgtgagata
gttacgaccacgacgcacaagacgcttcgcggggcgcggggcgggatggttttgtgccgg
gaggagtttgcgaagaagctgaacagccgggtatttcccgggcttcagggcgggccgctg
atgcatgcgatcgcgggcaaggccgtcgcgtttggggaggctcttcagccggagttcagg
cagtacgcgcagagcatagtggacaacgcccgggcgatggccgaggggcttttggagggc
ggggtgaacctcgtctccggcggaacggacaaccacatgatgctcgttgaccttcgcggg
acggggacgacgggcaaggagcttgagggaaggctcgaagaggtcggggttacgtgcaac
aagaacatggttccgaacgacccggaggggccgatggtgacgagcggcgtcaggctcggt
acgcccgcgatgacgacgcgcgggatgggcgaggacgagatgcgagagatcgccgccatt
atcgccaagaccgtgcacggcgagacgcaggggcttcgggagcgcgtcgcgatccttacg
gacgccttcccactctatggttga
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