Rubrobacter radiotolerans: RradSPS_1743
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Entry
RradSPS_1743 CDS
T03080
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rrd
Rubrobacter radiotolerans
Brite
KEGG Orthology (KO) [BR:
rrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rrd03032
]
RradSPS_1743
03400 DNA repair and recombination proteins [BR:
rrd03400
]
RradSPS_1743
Enzymes [BR:
rrd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
RradSPS_1743
DNA replication proteins [BR:
rrd03032
]
Prokaryotic type
DNA Topoisomerases
RradSPS_1743
DNA repair and recombination proteins [BR:
rrd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RradSPS_1743
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_Top1
ALIX_LYPXL_bnd
Motif
Other DBs
NCBI-ProteinID:
AHY47026
UniProt:
A0A023X4A7
LinkDB
All DBs
Position
complement(1826375..1828600)
Genome browser
AA seq
741 aa
AA seq
DB search
MRLIISEKANAAKKIAQFLAEGKVKEGKHRAVPHHTFDWKGEETVSIGLKGHILNPEYPE
EYSNWQKVEPSELIDAEILKPVSEKGVAAAIKSLAKKADSVIVATDYDREGELIGVEALS
IVFEAKPELADSVKRSRFSALTKGEVTRAFDELVEVSHDLADAGEARQDIDLIWGATLTR
WVSRATKRYGSAFLSVGRVQSPTLVLIAERELERRAFKPEPYWEIEATLKNGGDPFKVAH
RHGRFKDEGEAQAALSNLKETARVVEVRQKAATRPAPAPFNTTSFLTAAASLGIGPSRAA
RIAEDLYTDGYISYPRTDNTVYPASLDLREVLTVLKGVEEVGETAGALLAKGELKPTRGK
KETTDHPPIYPTGYVSKAALRDDQWKIYQLVVRRFLATLSEPSKSLRTTLNFDSGGEGLT
TGGTVITEEGWLGVYPYSRRADEEIPNLGEGDVVNVVEKELLAKETQPPGRYGQGRLLNV
MEDLGLGTKATRPNIIQNLYDRGYVHSDPIIPTEKGISVAQGLKEFAAEIASHEMTAKLE
RSMDDISEGKTDKRAVVDESRDLLREVYKHLDSAEEQFSDIVWRGIRSDETLGKCPESGH
NLIVRRNRRSRKRFVGCEGYPDCTVTYPLPQKGSIIPTGTTCEECGSPEIKVLGGRRPWI
TCIDMDCPKKQEQMKAAEEARKAREGEEAAKDAGKANAENEAERPSEVSEVASDAAKSSN
GNSGNGEEPREKLASSGTRAS
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgcgacttatcatctcggagaaggcaaatgcggcgaagaagatcgcccagttcttagct
gaaggaaaggtgaaggaaggcaagcaccgcgccgtcccgcaccacaccttcgactggaag
ggcgaagagacggtctccattgggctgaagggacacatcctcaaccccgagtaccccgag
gagtactccaactggcagaaggtagagccctcggagcttatcgacgccgagattctcaag
cccgtgagcgagaagggcgtcgccgcggcgataaagtcgctcgccaaaaaggccgactcc
gttatcgttgcaaccgactacgaccgcgagggggagcttatcggggttgaagcgctctct
attgtcttcgaggcgaagccggagcttgcagacagcgtgaagcgcagccgcttctcggcg
ctcacgaagggcgaggttacgcgcgccttcgatgagctggtcgaggtctcgcacgatctc
gccgacgcgggtgaggcgaggcaggacatagacctgatctggggcgcgaccctcacgcgc
tgggtctcgcgcgccacgaagcgctacggctcggcctttctctccgtcgggcgtgtccag
tccccgacgctcgtcctgatcgccgagcgcgagctcgagcgccgggccttcaagcccgag
ccgtactgggagatcgaggccaccctcaagaacggcggcgacccgttcaaggtcgcgcac
cggcacgggcgtttcaaggacgagggcgaggcgcaggccgcgctttcgaacctgaaggag
acggcccgggtcgtcgaggtgaggcagaaggccgcgacccgccccgcccctgcgccgttc
aacacgacgagcttcctcacggcggcggcttcgctcgggataggtccctcgcgcgcggcg
cgcatcgccgaggacctctacaccgacggctacatctcctatccccggacggacaacacc
gtctacccggcctcgctcgacctgcgcgaggtgcttacggtgctcaagggggtcgaggag
gtcggtgagaccgcgggcgcgctccttgcgaagggcgagctgaagccgacgcgcggcaag
aaggagacgaccgaccatccgccgatctacccgaccggctacgtctcgaaagccgcgctc
cgcgacgaccagtggaagatctaccagctcgtcgtccggcgcttcctcgctactctgtcg
gagccgtcgaagtcgcttcgcactacgctcaacttcgactcgggcggcgagggtctcaca
acgggcgggacggttatcacagaagagggctggctcggggtatacccgtacagccgccgg
gcggacgaggagatcccgaacctcggggaaggcgacgtcgtgaacgtcgttgagaaagag
cttctcgcgaaggagacccagccgccgggccgctacggtcagggacgtcttttgaacgtg
atggaggacctcgggctcgggacaaaggccacgcgcccgaacataatccagaacctctac
gaccggggctacgtccactccgacccgatcatccccacggagaagggcatctcggtcgcg
caggggctcaaggagttcgcggcggagatcgcctcccacgagatgacggcgaagctggag
cggagcatggacgacatctccgagggcaagaccgacaagcgcgccgtcgtcgacgagtcg
cgcgacctgctgcgcgaggtctacaagcacctcgacagcgccgaggagcagttctcggac
atcgtctggcgcggcatccgctccgacgagacgctcggcaagtgccccgagagcgggcat
aacctgatcgtccgccgcaaccgtcgcagccgcaagcgcttcgtcggctgcgagggctac
ccggactgcaccgtaacctacccgctcccgcagaagggctccatcatcccgaccggcacg
acctgcgaggagtgcggaagccccgagataaaggtgctcggcggccgaaggccctggatc
acctgcatcgatatggactgcccgaaaaagcaggagcagatgaaggccgccgaggaggcc
agaaaggcccgcgagggcgaggaggcggcgaaggacgccgggaaggccaacgccgagaac
gaggccgagcggccctccgaggtctccgaggtcgcctccgacgccgcaaagtcctcgaac
gggaactccggaaacggcgaggagccccgcgagaagctcgcctcctccgggacgcgggct
tcttag
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