Rubrobacter radiotolerans: RradSPS_1835
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Entry
RradSPS_1835 CDS
T03080
Name
(GenBank) GGDEF: diguanylate cyclase (GGDEF) domain
Organism
rrd
Rubrobacter radiotolerans
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
EAL
PAS
PAS_4
PAS_9
GGDEF
PAS_8
PAS_11
PAS_7
GGDEF_2
PAS_10
sCache_3_3
Cache_3-Cache_2
GAF_PdtaS
KaiA
Motif
Other DBs
NCBI-ProteinID:
AHY47118
UniProt:
A0A023X464
LinkDB
All DBs
Position
complement(1925800..1929435)
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AA seq
1211 aa
AA seq
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MHSENTTGLVRDAGDVSPRLHALTSAFEHLGAAVLVTKGAPVRSPGPEIVYANAAFYRMT
GYSPGEIIGRTPRILQGENTNRASLRRVREALERGEAVEAEMVNYRKDGSEFWVDMSLAP
VFDKCDGKDGRGPEFWVSVQRETTRRKRAERELDALLAQYGTEMVAVLEPDGTPRYQSPA
VGETLGYDHAEIVGEDYFTRVHPEDAGRLQEAIAGCLATPGESPPVEFRIRHADGTWRWF
ESRGNNLSDNPEVGAIVVRTRDVTDRREAEERLKETEEKYRTLVENVPGITYIEDGETAE
TLYDSPQIEEILGYERDTYKKDPLYFYKIMHPEDRDAALDELKTSQKDGTHSIMEYRVYA
ADGRLVWLRDEATVVEQGGRKNLRQGFLFDITERKRTEQQLRETEQRYRTLVEQIPAATY
VQSVEHSGTLLYASPRIEDLLGYPPESFVESALWRDLLHPDDREAVLEEGRRADRTGERF
KMEYRMVHRDGRTVWILDDAVLLHDAEGEPSYWHGIMYDVTGRKRAEAELRAREERFRSL
VQNASDLIAIVGRDRRTLYLSPSFERVQGYNPDEHVGKVGFEAIHPEDLADVEAAFRELL
REPEKSLRVEFRLRHRDGSWLHLEAIGKNLLDDPAVGGVVVNARDVTERRRAEQALKRSE
DHLKSVTSAAPIILFALDREGTITLARGRGLEALGIKDDLVGQQIFEVYREFPAVLENVQ
RALAGEEVARTVEIGSFFFDARYSPVRDERGEVTGVIGVATDITERQKLERELEHRAFHD
PLTGLANRALCMDRIEHALERARRRNAPVTLLFMDLDDFKVVNDSLGHTTGDELLVEVAS
RLRACVRPGDTLARLGGDEFVVLLEETDLDGAVRVTERISDALGAPFYLGEARYQRFVNV
SVGITVARPSGQRAGDLLREADLAMYRAKEDGKAGYKVFDAEMGTRTLRRVELESDLRRG
LENGEFELHYQPVVSLPEGRITGFEALVRWRHPERGLVSPAEFIGLMEKTGLIVPLGRWV
LEEACRDLKRWQDARPERWPLEVCVNLSARQFRSPRLYSEVARTVERAGVRPETVNLEIT
ESVAMSGATERETLKRLRELGVGLKIDDFGTGQSSLAYLKHLPVDALKICRIFAKDLARS
ATDREIVGAIVRLGHALGLRVIAEGVETPEQLEVFRQLGCDLAQGYLFSRPVPAADVLGL
LAGNSVARSGS
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atgcatagtgagaacacaaccgggctggtgcgggatgctggtgacgtgtccccgcgcttg
catgcgctgacctccgccttcgagcacctcggggcggcggtgcttgttacgaagggagcg
ccggtaaggagcccggggccggagatcgtctacgcgaacgccgcgttctaccgaatgacc
gggtactcgcccggcgagatcatcggacgtaccccacgcatcctgcagggcgagaacacg
aaccgggcctcgctgcggcgcgtgcgggaggcgcttgagcggggcgaggccgtcgaggcc
gagatggtcaactaccgcaaggacggctcggagttctgggtggacatgagcctcgcgccc
gtcttcgacaagtgcgacggcaaggacggcagagggccggagttctgggtctccgtgcag
cgcgagaccacgcgcaggaagcgcgcggagagggagctcgacgcgctgctcgcgcagtac
gggacggagatggtagcggtgctggagcccgacgggacgccccgctaccagagcccggcg
gtcggggagacgctcggctacgaccacgcggagattgtcggggaggactacttcacgcgc
gttcaccccgaggatgcggggaggttgcaagaagcgatcgccgggtgccttgcgaccccc
ggtgagagcccgccggtggagttcaggatacgccacgccgacggcacgtggcgctggttt
gagtccaggggcaacaacctcagcgacaacccggaggtcggggccattgtcgtgaggacc
cgcgacgtgacggaccgccgggaggccgaggagcgcctgaaggagaccgaggagaagtac
cggacgcttgtagagaacgtccccggcatcacgtatatcgaggacggcgagaccgccgag
acgctctacgacagcccgcagatagaggagatcctcggctacgagagggacacctacaaa
aaggacccgctgtacttctacaagatcatgcaccccgaagaccgggacgcggcgcttgac
gagttgaagacgtcgcagaaggacgggacgcactcgatcatggagtaccgggtctacgcc
gccgacgggcggctcgtctggcttcgggacgaggcgacggtcgtcgagcaggggggacgg
aagaacctcaggcagggctttctcttcgacatcaccgagcgcaagcgcaccgagcagcag
ctcagggagaccgagcagaggtaccgcacgctcgtggagcagatcccggccgcgacctac
gtccagtccgtcgagcacagcgggacgctcctgtacgcgagcccccggatagaggacctg
ctcggctacccgcccgagagctttgtcgagagcgcgctctggcgggacctgctgcatccg
gacgaccgggaagcggtgctcgaagagggccgccgcgccgaccggaccggcgagcgcttc
aagatggagtaccggatggtccaccgggacgggcggacggtgtggatcctcgacgacgcc
gtgctcctgcacgacgccgagggcgagccctcctactggcacggcatcatgtacgacgtc
acgggacgcaagcgcgccgaggccgagcttcgggcccgggaggagcggtttcgctcgctc
gttcagaacgcctcggaccttatcgcgatcgtcggccgcgacaggcggacgctctacctg
agcccctccttcgagcgggtgcagggctacaacccggacgagcacgtcgggaaggtcggt
ttcgaggcgatccacccggaggacctcgcggacgtcgaggcggccttcagggagttgctc
cgggagccggagaagtccctgcgcgtagagttccggcttcgccaccgggacggctcgtgg
cttcacctggaggccataggcaagaacctgctcgacgatccggccgtcggcggcgtcgtc
gtaaacgcccgcgacgtcacggagcgccggcgcgcagagcaggccctcaagagaagcgag
gatcacctcaagagcgttacctccgcggccccgatcatcctcttcgccctcgaccgggag
gggacaatcacgctcgcccgggggcggggactggaagctctcgggatcaaagacgacctc
gtgggacagcagatcttcgaggtctaccgggagtttccggccgtccttgagaacgtccag
cgggcgcttgcaggagaggaggtcgcccggacggtcgagatcgggagcttcttcttcgat
gcgcgctactcgccggtgcgcgacgagcgcggcgaggtgacgggggttatcggggttgca
acggacatcaccgagcgtcagaagctggagcgggagctggagcaccgggccttccacgat
ccgcttacggggcttgcgaaccgcgccctgtgcatggaccgcatagagcacgcccttgag
cgggcgcgccgccggaacgctccggtcacacttctctttatggacctcgacgacttcaag
gtcgtcaacgactcgctcggacacacgacgggcgacgagttgctcgtcgaggtcgcaagc
cgcctcagggcctgcgtcaggcccggcgacacgctcgcccggctcggcggcgacgagttc
gtcgtgctactggaggagaccgacctcgacggcgcggtgagggtgaccgagcggatctcg
gacgctctgggcgctccgttctacctcggggaggcgcgctaccagcggttcgtgaacgtt
tcggtcgggataacggttgcgcgtccctccgggcagcgcgctggggaccttctgcgggag
gcggaccttgcgatgtaccgggcgaaggaggacggcaaggcgggctacaaggtcttcgac
gccgagatgggaacgcgaaccctccggcgcgtggagcttgagagcgaccttcgccggggg
ctcgaaaacggtgagttcgagcttcactaccagccggtagtctcgctcccggaggggagg
atcacgggcttcgaagctctcgttcgctggcggcatccggaacggggactcgtctcaccc
gccgagttcatcgggctgatggagaagaccggcctgatcgtccccctcggccggtgggtg
ctggaggaggcgtgccgggacctcaagcgctggcaggacgcgcgtcccgagaggtggcct
ctggaggtctgcgtgaacctctcggcccggcagttccgctcgccccggctctacagcgag
gtcgcccggacggtcgagagggccggggttcggccggagacggtgaacctggagatcacc
gagagcgtagccatgagcggcgcgaccgagcgcgagacactgaagcgcctccgggagctc
ggggtcgggctgaagatcgacgacttcggcaccgggcagtcctcgctcgcctacctcaag
cacctgccggtggacgcgctgaagatatgccggatcttcgcaaaggacctcgcccggagc
gctacggaccgggagatagtcggggcgatcgtccgcctcggacacgcgctcgggctcagg
gttatcgcggagggggtcgagacgccggagcagctggaggtcttccggcagctcggctgc
gacctcgcgcagggctacctgttctcccggcccgtcccggcggcagacgtgctcgggctc
ctcgccgggaactccgttgcccggtccgggagctga
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