Rubrobacter radiotolerans: RradSPS_1839
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Entry
RradSPS_1839 CDS
T03080
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
KO
K07516
3-hydroxyacyl-CoA dehydrogenase [EC:
1.1.1.35
]
Organism
rrd
Rubrobacter radiotolerans
Pathway
rrd00071
Fatty acid degradation
rrd00362
Benzoate degradation
rrd00650
Butanoate metabolism
rrd01100
Metabolic pathways
rrd01120
Microbial metabolism in diverse environments
rrd01200
Carbon metabolism
rrd01212
Fatty acid metabolism
Module
rrd_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
rrd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
RradSPS_1839
09103 Lipid metabolism
00071 Fatty acid degradation
RradSPS_1839
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
RradSPS_1839
Enzymes [BR:
rrd01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
RradSPS_1839
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Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
3HCDH
ECH_1
ECH_2
NAD_binding_2
DAO
NAD_Gly3P_dh_N
F420_oxidored
ApbA
AlaDh_PNT_C
NAD_binding_8
Motif
Other DBs
NCBI-ProteinID:
AHY47122
UniProt:
A0A023X3T9
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All DBs
Position
complement(1933521..1935893)
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AA seq
790 aa
AA seq
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MRQIRKVAVLGAGTMGAAIAGHCANAGLDVELLDIAPEEGDDKNAVVKGGFERMTKSRPP
ALMAKSVADRIRLGNFEEDFERIADADWIVEAIIEKLGPKQELWARVEKTAREDAVLSSN
TSGIPLHEVADGRSEGFKKRFLGTHFFNPPRYLKLLELIPTEDTDPAIVEGMRTFGERVL
GKGGVIAKDTPNFIGNRLGSFAGMQSVTYAFENGYGIEEIDAITGPLIGHPKTATFRLND
TVGLDIAVGVAENLYEAVPEDESREDLKPHPKLKEMLERNLLGNKTGSGFYKRDKRDGKT
VFDVLDLETFEYKPASDPNVPLVNRAREQGDLADRLRYIMDNAEKDRHAKYLRDTLLPYL
AYSARRIPEISDTLVDADHAMEWGFGHKAGPFRTWDMLGVEETVNRMKSLDIEVAEWVEE
MLASGNDSFYREEDGRELVYSPLSKGYEPVYEDPMVVSLDALRDEGKELERNDSASLLDL
GDGVLCLEFHSRGNSIDGNTLEIAKKALAALERDDVAGLVIGNEGSNFCVGANLGEVAFA
AKGGMLQIVEKRVEALQNILMAFKYAPKPVVSAPRGQTLGGGLEICLHSDRVVAAGETYM
GLVEAGVGLIPAGGGTKELARRIVSRPLAKAPDAPVLPFLQKAFETIATAKVAASGLEAR
ELGFLDEDDLVVMNADHLIATAKREVLDLAASYAPPEKGQNVYAAGRSARAALEVGVRTL
QWGRYASEYDGVVAGQSARVLTGGDLSLGQWVPEEHLLRLEREGFLKLLGNEKTHERIEA
MLRTGKPLRN
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgagacagatccggaaggtagcagttcttggagcggggacgatgggagcggcgatagcg
ggccactgcgcgaacgccgggctcgacgtggagctgctcgacatcgctcccgaggagggc
gacgacaagaacgccgtggtcaagggcggcttcgagcggatgacgaagtcgcggccgccc
gcgctcatggccaagagcgtcgcagacaggataaggctcggcaacttcgaagaggacttc
gagcgcatcgccgacgcggactggatcgtcgaggcgataatcgagaagctcggcccgaag
caggagctctgggcgcgcgtcgagaagacggcccgcgaggacgccgttctctcgtcgaac
acctcgggcatcccgctccacgaggtcgcagacggacggagcgagggcttcaagaagcgc
tttctcgggacgcacttctttaacccgccgcgctacctgaagctgctggagcttatcccg
accgaagacaccgaccccgccatcgtcgaggggatgaggaccttcggagagcgcgtgctc
ggcaagggcggcgttatcgccaaggacaccccgaactttatcgggaaccgcctcggctcc
ttcgccgggatgcagtccgtaacctacgccttcgagaacggctacggcatcgaggagatc
gacgccatcaccggtcccctcatcggccaccccaaaacggcgaccttccgactaaacgac
accgtcggcctcgacatcgccgtcggcgtcgccgagaacctgtacgaggccgtcccagag
gacgagtcgcgcgaggacctcaagccgcacccgaagctgaaggagatgctggagaggaac
cttctcggcaacaagaccggaagcggcttctacaagcgcgacaagcgcgacggcaagacc
gtcttcgacgtgctcgacctcgaaactttcgagtacaagcccgcctccgacccgaacgtg
ccgctcgtgaaccgggcgcgcgagcagggcgatctcgcagacaggctccgctacatcatg
gacaacgccgagaaggaccggcatgcaaagtacctcagggacacgctgctgccgtacctc
gcctactccgcgcggcgcatacccgagatctcggacaccctcgtggacgccgaccacgcg
atggagtggggcttcggacacaaggccggaccgttccgtacctgggacatgctcggcgtc
gaggagaccgtaaaccgcatgaagtccctcgacatcgaggttgcggagtgggtcgaggag
atgctggcgagcggcaacgactccttctaccgggaggaggacggccgggagcttgtctac
agcccgctcagcaaaggctacgagccggtctacgaggacccgatggtcgtctcgctcgac
gcgctgcgcgacgaggggaaggagcttgagcgcaacgactccgcaagcctcctcgacctc
ggggacggcgtgctgtgccttgagttccactcgcgcggcaactccatagacggcaacacc
ctggagatcgccaagaaagccctcgccgcgcttgagcgggacgacgtcgcggggctcgtg
atcggcaacgaagggagcaacttctgcgtcggggcgaacctcggcgaggtcgcgttcgcc
gcgaagggcgggatgctccagatcgtcgagaagcgcgtcgaggcgctgcagaacatcctc
atggccttcaagtacgccccgaagcccgtggtctccgccccgaggggccagacgctcggt
gggggccttgagatatgcctccactccgaccgggtcgtcgcggcgggcgagacgtacatg
ggcctcgtcgaggcgggggtcggccttataccggccggaggcggcacgaaggagcttgcc
cggcgcatcgtctccaggccgcttgcgaaggctccggacgcgccggtcctgccgttcctg
cagaaggctttcgagacgatcgcgacggcgaaggtggcggcgagcggccttgaagcccgg
gagctcggcttcctcgacgaggacgacctcgtggtgatgaacgccgatcacctcatcgcc
accgccaagcgcgaggtcctcgacctcgccgcaagctacgctcccccggagaagggccag
aacgtctacgcggccggacgctcggcgcgggcggctctcgaggtgggggtgcggaccctt
cagtggggccgctacgcgagcgagtacgacggcgtcgtcgccgggcagagcgcgcgggtg
ctcacgggcggagacctctctctcgggcagtgggtcccggaggagcacctcctcaggctg
gagcgcgagggcttcctgaagctcctcggaaacgagaagacccacgagcgcatcgaggcg
atgctccgcaccggaaagccgctcaggaactag
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