Rubrobacter radiotolerans: RradSPS_1842
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Entry
RradSPS_1842 CDS
T03080
Name
(GenBank) Long-chain acyl-CoA synthetases (AMP-forming)
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rrd
Rubrobacter radiotolerans
Pathway
rrd00061
Fatty acid biosynthesis
rrd00071
Fatty acid degradation
rrd01100
Metabolic pathways
rrd01212
Fatty acid metabolism
rrd02024
Quorum sensing
rrd04146
Peroxisome
Module
rrd_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rrd00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
RradSPS_1842
00071 Fatty acid degradation
RradSPS_1842
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
RradSPS_1842
09145 Cellular community - prokaryotes
02024 Quorum sensing
RradSPS_1842
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rrd01004
]
RradSPS_1842
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rrd04147
]
RradSPS_1842
Enzymes [BR:
rrd01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
RradSPS_1842
Lipid biosynthesis proteins [BR:
rrd01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
RradSPS_1842
Exosome [BR:
rrd04147
]
Exosomal proteins
Exosomal proteins of breast milk
RradSPS_1842
Exosomal proteins of breast cancer cells
RradSPS_1842
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
AHY47125
UniProt:
A0A023X562
LinkDB
All DBs
Position
complement(1936815..1938632)
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AA seq
605 aa
AA seq
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METSGDTRSAGGAAARSESGEVRSLVGMLRRSVERRGGNTAYGWKDGGEWRTLSYVGLWN
RVRDVAAGLARLGVGRGDRVALMSTNRIEWPLVDFAVQSLGAATVPVYPTVEASQVAHIL
GNSGAKVIFTENARLAERVASVRDEVESLENVVVIEGEYEDALRFSEVEKSGKDEPLEGW
EEGWKALGREDLATIIYTSGTTGLPKGAMLTHGNILANLEGIQAALPTNADDVFLSFLPL
SHVFERTAGQYNALWAGAATYYAESIDTVPENLREVKPTVMSSVPRLYEKMHDRVRAMVA
EGPASRQRIFNAAIEAGKKRYEHETRGEKVPLGLRLKMKLFDRLVFGKLREAVGGRPRFF
VSGGAKLDGEVGKFFHAAGVKVMEGYGLTETSPVVACNRLESVRFGTVGKPLENLEVRIG
EGGEVQVKGPSVFKGYLDNPEANEAAFTEDGFYRTGDVGELDEEGYLTITDRLKNLLVLS
TGKNVAPQPIEAALATAKHISQAVVLGDGKKYVSALIVPDYETVRKTLGVEKDDRELSQD
ERVRELIQRDLDEACGRFSDYERPKKFELLSRELTQEDGELTPTLKVKNRVVRDRYEDVI
QKLYA
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggagacatctggagataccaggagcgcgggcggcgcggcggcgaggtcggagtcgggc
gaggtgaggagccttgtcgggatgctccggcggagcgtggagcgtcgcggggggaacacg
gcttacggctggaaggacggcggggagtggcggacgctctcctacgttgggctctggaac
cgggtccgggacgttgcggcggggcttgcgcggctcggggtcgggcgcggcgaccgggtc
gcgctgatgagcacgaacaggatagagtggccgctcgttgactttgcggtgcagagcctc
ggggcggcgacggtcccggtctatccgacggtcgaggcgtcgcaggtcgcgcatatcctg
gggaactcgggggcgaaggtgatcttcaccgagaacgcccgccttgccgagagggtcgcg
agcgtcagggacgaggtcgagagccttgagaacgtggtcgttatagagggcgagtacgag
gacgctctgcgcttctccgaggtagagaagagcggcaaggacgagccgctcgaaggctgg
gaggagggctggaaggcgctcgggcgcgaggaccttgcgacgatcatctacacgagcggg
acgacagggcttccaaagggagcgatgctcacgcacggcaacatcctcgcaaaccttgag
gggatacaggccgcgctcccgacaaacgccgacgacgtctttctctcgttcctgccgctc
tcgcacgtcttcgagcggacggccggacagtacaacgcgctgtgggccggggccgcaacg
tactacgccgagtccatagacaccgtcccggagaacctgcgcgaggtgaagccgacggtc
atgtcgagcgtaccgcggctctacgagaagatgcacgaccgcgtccgggcgatggtcgcc
gagggaccggcctccaggcagaggatcttcaacgccgccatcgaggccgggaagaagcgc
tacgagcacgagacgcgcggggagaaggtcccgctcggcctgagactgaagatgaagctc
ttcgaccggctcgtcttcgggaagctccgggaggccgtaggcgggaggccgcgcttcttt
gtctccggcggagcgaagctcgacggcgaggtcgggaagttctttcacgccgcgggggtc
aaggtcatggagggctacggcctcaccgagacctcgcccgtcgtcgcgtgcaaccgcctt
gagagcgtgcgtttcgggaccgtcggcaagccgctcgagaacctggaggtcaggatcggc
gagggcggcgaggtccaggtgaaggggccgagcgtcttcaagggatacctagacaacccc
gaggcgaacgaggccgcctttaccgaagacggcttctaccggacgggcgacgtcggggag
ctcgacgaggagggttatctgacgatcacggaccgcctgaagaacctgctcgtcctctcg
acgggcaagaacgtcgccccgcagcccatcgaggccgcgctcgcaacggcgaagcacatc
tcgcaggccgtcgttctcggggacgggaagaagtacgtctccgcgcttatcgtgccggac
tacgagaccgtaagaaagaccctcggcgtcgagaaggacgacagggaactctcgcaggac
gagcgcgtcagggagctgatacagagagacctggacgaggcgtgcgggcggttctcggac
tacgagcggccgaagaagttcgagcttctgtcaagggagcttacgcaggaagacggagag
ctgacgccgaccctgaaggtcaagaaccgggtggtcagggacaggtacgaggacgtgatc
cagaagctgtacgcatga
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