Rubrobacter radiotolerans: RradSPS_1910
Help
Entry
RradSPS_1910 CDS
T03080
Name
(GenBank) tRNA pseudouridine(38-40) synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
rrd
Rubrobacter radiotolerans
Brite
KEGG Orthology (KO) [BR:
rrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rrd03016
]
RradSPS_1910
Enzymes [BR:
rrd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
RradSPS_1910
Transfer RNA biogenesis [BR:
rrd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
RradSPS_1910
Prokaryotic type
RradSPS_1910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Ifi-6-16
Motif
Other DBs
NCBI-ProteinID:
AHY47193
UniProt:
A0A023X4C6
LinkDB
All DBs
Position
complement(2004317..2005078)
Genome browser
AA seq
253 aa
AA seq
DB search
MSRTRRKLAALVEYDGTDFDGWARQPGRRTVEGELARALGTILRHPVKLTVAGRTDAGVH
ASGQVASFFSEAAMEPDEVAYRATAVLPKDVAVRRCVSAPDSFDARRDARSRSYRYRLVN
APTRSALDRRYAAYVARPLDLGLLRGAADLVLGLHDFTAFTPTKSYHTRFTREVSLSCWE
REGEVLVYSVTADSFMYGMVRALVGTMIEVGDGSRSLASFAELLGGGRRSGSGPSAPARG
LTLVGVEYANLTL
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
gtgagccgcacccgaaggaagctcgccgcgctcgtcgagtacgacgggacggacttcgac
ggctgggcgaggcagccgggacggcgcaccgtcgagggtgagctcgcgcgggcgctcggg
acgatcctgcgccacccggtgaagctgaccgtcgccggacggacggacgccggggtacac
gcgagcggacaggtcgcctccttcttctcggaggctgcgatggagccggacgaggtcgcc
taccgcgcaacggccgtgctcccgaaggacgtcgccgtgcgccgctgcgtgtcggccccg
gacagcttcgacgcccgccgcgacgcccggagccgctcctacaggtaccggctcgtcaac
gctccgactcgctcggcgctggaccggcgctacgccgcctacgtcgcccggccgctcgac
ctcgggcttctgcgcggggcagcggacctcgtcctcgggttgcacgactttaccgccttc
accccgacaaagagctaccacacccgctttacgcgcgaggtcagcctgtcgtgctgggag
cgcgagggagaggtgctcgtctacagcgtaacggccgactcgtttatgtacgggatggtc
cgggcgcttgtcgggaccatgatcgaggtcggagacggctcgcgctcgctcgcctcgttc
gcggagcttctcgggggcggccggcggagcgggagcggaccctcggccccggcgcggggc
ctcacgctcgtgggcgtcgagtacgctaacctgactctctag
DBGET
integrated database retrieval system
